Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL132765.1-201ENST00000434165 553 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 AP000949.1-201ENST00000438328 629 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 MTCO2P9-201ENST00000503214 694 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 AC025674.1-201ENST00000507074 324 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 AC112518.2-201ENST00000508565 425 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.97□□□□□ -1.77
PDLIM1O00151 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM1O00151 OR5BC1P-201ENST00000529327 739 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 MTND5P21-201ENST00000531961 522 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.97□□□□□ -1.77
PDLIM1O00151 AL121594.4-201ENST00000556211 1196 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM1O00151 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM1O00151 AC005191.1-201ENST00000603950 358 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 RMST_10.1-201ENST00000616309 154 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 AP005019.3-201ENST00000620418 560 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 CR392039.4-201ENST00000624968 501 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.97□□□□□ -1.77
PDLIM1O00151 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM1O00151 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.97□□□□□ -1.77
PDLIM1O00151 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.97□□□□□ -1.77
PDLIM1O00151 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM1O00151 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM1O00151 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.97□□□□□ -1.77
PDLIM1O00151 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.77
PDLIM1O00151 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
PDLIM1O00151 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM1O00151 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM1O00151 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
PDLIM1O00151 RNU6-98P-201ENST00000384173 107 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PDLIM1O00151 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.96□□□□□ -1.78
PDLIM1O00151 RPL23AP59-201ENST00000399415 461 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 RN7SKP285-201ENST00000410137 318 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.96□□□□□ -1.78
PDLIM1O00151 AL158050.1-201ENST00000416077 457 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM1O00151 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM1O00151 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM1O00151 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM1O00151 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM1O00151 DNAJC19P7-201ENST00000428811 344 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.96□□□□□ -1.78
PDLIM1O00151 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
PDLIM1O00151 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM1O00151 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM1O00151 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM1O00151 AC114495.1-201ENST00000441274 436 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM1O00151 RPL6P5-201ENST00000445678 828 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 MOB1AP2-201ENST00000446060 614 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.96□□□□□ -1.78
PDLIM1O00151 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM1O00151 TPT1P13-201ENST00000449760 499 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 MTND2P8-201ENST00000450555 1025 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 AC010468.1-201ENST00000461022 817 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 AC006463.2-201ENST00000473326 348 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 AP001086.1-201ENST00000494882 321 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.96□□□□□ -1.78
PDLIM1O00151 AC026784.1-201ENST00000507986 352 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM1O00151 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.96□□□□□ -1.78
PDLIM1O00151 OR8G5-201ENST00000524943 1041 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 HIGD1AP10-201ENST00000527837 282 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 AC106785.3-201ENST00000564064 847 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 AL133457.1-201ENST00000564251 987 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 AC007599.1-201ENST00000568688 1174 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 AC011492.1-201ENST00000600023 315 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM1O00151 MIR8084-201ENST00000614105 89 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM1O00151 MIR8058-201ENST00000615737 89 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 AP003072.4-201ENST00000624580 310 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 AP000720.1-201ENST00000625091 483 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM1O00151 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM1O00151 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM1O00151 MAPK10-373ENST00000641983 6772 ntBASIC3.96□□□□□ -1.78
PDLIM1O00151 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM1O00151 ZNF542P-204ENST00000482727 1305 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 MTCO1P18-201ENST00000455518 1419 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM1O00151 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
PDLIM1O00151 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM1O00151 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM1O00151 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM1O00151 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM1O00151 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
PDLIM1O00151 AC006042.3-201ENST00000454684 1469 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AC024560.2-201ENST00000507981 1497 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM1O00151 HMGB3P18-201ENST00000406327 590 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 MIR1303-201ENST00000408625 86 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 Y_RNA.625-201ENST00000411256 107 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AL158825.1-201ENST00000414735 521 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AIMP1P1-201ENST00000418670 937 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AL139095.3-201ENST00000419672 1203 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.95□□□□□ -1.78
PDLIM1O00151 AL606495.1-201ENST00000422100 813 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AL356387.2-201ENST00000422272 243 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms