Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PANCR-202ENST00000513690 448 ntTSL 2 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC107934.2-201ENST00000518653 310 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC125611.2-201ENST00000551907 647 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 TRAV15-201ENST00000556680 249 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC005479.3-201ENST00000602790 431 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC098935.2-201ENST00000604222 466 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC114878.2-201ENST00000604863 1251 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AL161912.3-201ENST00000605404 628 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AL512329.2-201ENST00000607350 548 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC083809.1-201ENST00000615051 472 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC116563.2-201ENST00000624751 535 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC096656.1-201ENST00000623826 1364 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC090337.1-201ENST00000579651 2074 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 RN7SKP275-201ENST00000364626 301 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 RNA5SP231-201ENST00000410496 138 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 RNU4-25P-201ENST00000410569 230 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 RAP1BP1-201ENST00000412709 553 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 MTND2P15-201ENST00000418575 892 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC093162.1-201ENST00000419682 124 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC006960.1-201ENST00000419980 153 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AL157831.1-201ENST00000426134 473 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC093716.1-201ENST00000435923 377 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC005154.2-201ENST00000438110 379 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 SERPINA7P1-201ENST00000443077 631 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 EEF1B2P5-201ENST00000444820 548 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 RNF148-202ENST00000447240 839 ntTSL 2 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC006480.1-201ENST00000449887 378 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 NF1P3-201ENST00000457709 450 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 VN1R105P-201ENST00000486595 910 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC108693.1-201ENST00000496068 432 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 PFN1P8-201ENST00000497012 543 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 RNA5SP519-201ENST00000516480 119 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 RNU6-711P-201ENST00000517255 106 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 TRMT10BP1-201ENST00000519377 943 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AP001781.1-201ENST00000530977 207 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 GCSHP4-201ENST00000538792 439 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AADACP1-206ENST00000561502 1193 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 MTCO3P13-201ENST00000577757 781 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 AC053481.4-201ENST00000583164 216 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 MIR3138-201ENST00000585238 82 ntBASIC1.94□□□□□ -2.1
CHKB-CPT1BH3BT56 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms