Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC091167.4-201ENST00000605079 184 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AC010200.2-201ENST00000605098 235 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AC055764.2-201ENST00000610089 670 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AC083865.1-201ENST00000636634 831 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 NOL8P1-201ENST00000508336 3529 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 GTF2H2B-203ENST00000508065 1432 ntBASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NEDD8-MDP1E9PL57 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 AC011266.1-201ENST00000624119 3569 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 RNU6-213P-201ENST00000384051 104 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 RNU6-481P-201ENST00000384194 107 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 MIR142-201ENST00000384835 87 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 AL590704.1-201ENST00000402856 794 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 HMGB1P13-201ENST00000406019 642 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 BX664727.1-201ENST00000416024 466 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 AC009302.1-201ENST00000417147 390 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 AC048351.1-201ENST00000420064 602 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 AL096829.2-201ENST00000446582 742 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 PPIAP15-201ENST00000479662 484 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 AC010627.1-201ENST00000503819 1294 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 AC112198.4-201ENST00000515450 351 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 SNORA67.7-201ENST00000516664 135 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 OR5AK3P-201ENST00000527486 1297 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 MTND5P21-201ENST00000531961 522 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 MIR3158-1-201ENST00000583596 81 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 AC090525.3-201ENST00000605601 189 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 MIR432-201ENST00000606207 94 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 VN1R9P-201ENST00000614184 867 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.1□□□□□ -1.75
NEDD8-MDP1E9PL57 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 METTL21EP-201ENST00000298105 713 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 SNORD56.4-201ENST00000363883 71 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 MIR93-201ENST00000385024 80 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AL035405.1-201ENST00000400795 710 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 HMGB3P19-201ENST00000403971 560 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 RNA5SP104-201ENST00000410989 118 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AL158053.1-201ENST00000441503 453 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 RPL7P55-201ENST00000450522 746 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 METTL15P1-201ENST00000481421 1045 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 RPL21P47-201ENST00000483696 477 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 RPS6P4-201ENST00000494693 758 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 RN7SL323P-201ENST00000494712 295 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AP002812.1-201ENST00000495378 474 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AC005912.1-201ENST00000495392 255 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 PRELID3BP7-201ENST00000503606 469 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AC016550.1-201ENST00000505348 785 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 RNA5SP154-201ENST00000516193 111 ntBASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.09□□□□□ -1.75
NEDD8-MDP1E9PL57 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms