Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 MIR375-201ENST00000362103 64 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 Y_RNA.38-201ENST00000362617 102 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 RNU5F-6P-201ENST00000362979 116 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 RNY4P14-201ENST00000363656 96 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 MIR217-201ENST00000384817 110 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 RNU6-1300P-201ENST00000391046 108 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 PPIAP9-201ENST00000403866 498 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 MTCYBP36-201ENST00000404146 440 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 RN7SKP240-201ENST00000410583 375 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 USP9YP13-201ENST00000417797 480 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 Z93242.1-201ENST00000427102 353 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 COX6CP18-201ENST00000448769 222 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AL033528.1-201ENST00000453780 140 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 RN7SL168P-201ENST00000463821 279 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 RPL7P38-201ENST00000488396 739 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 MTCYBP18-201ENST00000501056 747 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 FTH1P24-201ENST00000503502 462 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AC011352.3-201ENST00000505162 593 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 PAICSP4-201ENST00000517543 1253 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AC005363.1-201ENST00000530779 351 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 OR8L1P-201ENST00000534005 955 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AC107958.1-201ENST00000556576 290 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AL138976.2-201ENST00000563989 694 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 H3F3BP2-201ENST00000583907 357 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 DUXAP4-201ENST00000603046 613 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AC233280.2-201ENST00000603917 1070 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AC010680.3-201ENST00000604215 520 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AL499605.1-201ENST00000604628 403 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AC005332.6-201ENST00000613178 446 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AP000648.2-201ENST00000624182 404 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AC009033.1-201ENST00000624279 431 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 DDX18P3-201ENST00000404856 2007 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 ABCC13-202ENST00000463099 3842 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 Z95114.1-201ENST00000624264 14574 ntBASIC4.39□□□□□ -1.71
CGB1A6NKQ9 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CGB1A6NKQ9 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 AP001029.2-203ENST00000589795 4910 ntBASIC4.38□□□□□ -1.71
CGB1A6NKQ9 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 AP005435.3-201ENST00000531260 3198 ntBASIC4.38□□□□□ -1.71
CGB1A6NKQ9 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 RNU6-297P-201ENST00000384636 107 ntBASIC4.38□□□□□ -1.71
CGB1A6NKQ9 Y_RNA.573-201ENST00000384763 105 ntBASIC4.38□□□□□ -1.71
CGB1A6NKQ9 TMSB4XP8-201ENST00000402089 135 ntBASIC4.38□□□□□ -1.71
CGB1A6NKQ9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 TMSB4XP6-201ENST00000415187 135 ntBASIC4.38□□□□□ -1.71
CGB1A6NKQ9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 TMSB4XP1-201ENST00000424567 135 ntBASIC4.38□□□□□ -1.71
CGB1A6NKQ9 AC115283.1-201ENST00000427353 400 ntBASIC4.38□□□□□ -1.71
CGB1A6NKQ9 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 TIMM9P3-201ENST00000428659 274 ntBASIC4.38□□□□□ -1.71
CGB1A6NKQ9 AC007559.1-201ENST00000428736 355 ntBASIC4.38□□□□□ -1.71
CGB1A6NKQ9 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.38□□□□□ -1.71
CGB1A6NKQ9 MTND6P18-201ENST00000439477 513 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms