Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 AC009313.2-201ENST00000417893 1941 ntBASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 AL353692.2-201ENST00000407054 335 ntBASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 RPS3AP25-201ENST00000411660 793 ntBASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 AC245054.1-201ENST00000420944 258 ntBASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 AL451062.2-201ENST00000427515 271 ntBASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 HSPD1P21-201ENST00000436541 245 ntBASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 PDSS1P2-201ENST00000449397 678 ntBASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 HMGB1P5-202ENST00000451497 985 ntBASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 AC025445.1-201ENST00000502728 300 ntBASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 HMGN1P15-201ENST00000513870 295 ntBASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 HNRNPKP5-201ENST00000515300 253 ntBASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 AC008011.1-201ENST00000545989 227 ntBASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 AL163642.2-201ENST00000604722 1019 ntBASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 AL008729.2-201ENST00000606393 473 ntBASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 AL356121.2-201ENST00000624715 780 ntBASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 BDP1P-201ENST00000582658 1990 ntBASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SMIM28A0A1B0GU29 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AC009229.4-201ENST00000623854 1947 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AC007685.1-201ENST00000329806 452 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 MIR448-201ENST00000362131 111 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 RNU6-225P-201ENST00000384613 103 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AC093578.1-201ENST00000415219 368 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 MORF4L1P7-201ENST00000426038 703 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 HMGN2P31-201ENST00000432430 273 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 RPS20P1-201ENST00000434853 354 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AL590762.3-201ENST00000436372 640 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AL353748.1-201ENST00000440753 474 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AC021205.1-201ENST00000468797 348 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AC107398.1-201ENST00000486904 505 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AC005726.1-201ENST00000494679 427 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AF186190.1-201ENST00000517470 480 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 IGKV2D-19-201ENST00000523346 262 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 PDCD5P1-201ENST00000543528 309 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 MIR3922-201ENST00000585192 84 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AC123786.2-201ENST00000603459 275 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AC024220.1-201ENST00000603675 484 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 OR4H6P-202ENST00000603819 340 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AL162574.2-201ENST00000614618 657 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 AP000553.6-201ENST00000641242 118 ntBASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
SMIM28A0A1B0GU29 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SMIM28A0A1B0GU29 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.96□□□□□ -1.77
SMIM28A0A1B0GU29 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SMIM28A0A1B0GU29 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SMIM28A0A1B0GU29 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SMIM28A0A1B0GU29 ATP5F1P4-201ENST00000397288 746 ntBASIC3.96□□□□□ -1.78
SMIM28A0A1B0GU29 RNA5SP104-201ENST00000410989 118 ntBASIC3.96□□□□□ -1.78
SMIM28A0A1B0GU29 RPS29P4-201ENST00000414733 161 ntBASIC3.96□□□□□ -1.78
SMIM28A0A1B0GU29 LINC01881-201ENST00000416103 412 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms