Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 MTCO1P14-201ENST00000441695 1559 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 AL590704.1-201ENST00000402856 794 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 RN7SKP263-201ENST00000411194 309 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 CASKP1-201ENST00000412870 582 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 AL035423.1-201ENST00000420331 213 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 AL138785.1-201ENST00000425821 331 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 AC007967.1-201ENST00000455422 1159 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 SNRPGP5-201ENST00000456003 220 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 RPS4XP2-201ENST00000458402 793 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 AC007688.1-201ENST00000475592 759 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 AC016687.1-201ENST00000482574 353 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 MIR2276-201ENST00000516886 89 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 TOMM20P2-201ENST00000540082 421 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 AC009101.1-201ENST00000568135 242 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 AC010857.1-201ENST00000606398 594 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 AC020763.5-201ENST00000623298 430 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 PRO1804-201ENST00000623780 2050 ntBASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 RN7SKP227-201ENST00000364445 330 ntBASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 RNA5SP515-201ENST00000364570 118 ntBASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 RPL12P26-201ENST00000452430 487 ntBASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 AC010401.1-201ENST00000463867 348 ntBASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 AC103987.1-201ENST00000473394 348 ntBASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 AC068305.1-201ENST00000497406 726 ntBASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 CDH12P2-201ENST00000504393 298 ntBASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 AC067852.3-201ENST00000589177 561 ntBASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 AC006116.10-201ENST00000591836 581 ntBASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 AC010591.1-201ENST00000603941 649 ntBASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 AC090953.1-201ENST00000604305 1092 ntBASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRAV27A0A087WT01 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 AL136964.1-201ENST00000622038 2990 ntBASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 RAB28P1-201ENST00000411517 641 ntBASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 RPL23AP82-202ENST00000427528 469 ntBASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 AP000907.1-201ENST00000428428 510 ntBASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 BX679664.1-201ENST00000434429 253 ntBASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 PPIAP3-201ENST00000450588 505 ntBASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 HMGB3P21-201ENST00000452483 547 ntBASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 CENPBD1P1-201ENST00000464061 469 ntBASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 FTH1P9-201ENST00000513251 355 ntBASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 RN7SKP21-201ENST00000516503 220 ntBASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 AC107934.2-201ENST00000518653 310 ntBASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 MED28P5-201ENST00000528254 438 ntBASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.12□□□□□ -1.91
TRAV27A0A087WT01 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms