Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC239809.1-201ENST00000450470 217 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AL121877.1-201ENST00000453704 622 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AC119751.5-201ENST00000514077 770 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AP001636.2-201ENST00000525517 696 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AC011611.5-201ENST00000552477 578 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 NPM1P47-201ENST00000560843 856 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AC110743.1-201ENST00000584870 478 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 IPO5P1-202ENST00000600039 287 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 GAS5-AS1-201ENST00000602767 694 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AL049844.2-201ENST00000604280 628 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 PART1_2.1-201ENST00000612397 250 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AC006338.2-201ENST00000616864 791 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AC022893.2-201ENST00000564832 3296 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AC068538.1-201ENST00000376856 336 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 MIR513B-201ENST00000385136 84 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AL049693.1-201ENST00000402760 611 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 RNU4-22P-201ENST00000411058 166 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 RPL23AP26-201ENST00000412728 464 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 GSTM3P2-201ENST00000412746 530 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AC009965.2-201ENST00000425328 970 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 NPM1P24-201ENST00000428039 894 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 CR769776.1-201ENST00000441254 787 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AL591719.1-201ENST00000444669 744 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 RPL34P26-201ENST00000445636 354 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 MTATP6P26-201ENST00000445926 662 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 RPS27AP15-201ENST00000447672 466 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AL050341.1-201ENST00000447743 313 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AC092155.2-201ENST00000454675 477 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 RPL7P22-201ENST00000466005 733 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 RN7SL385P-201ENST00000468873 276 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AC010618.1-201ENST00000469924 477 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 BOLA3P3-201ENST00000505182 232 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 RN7SKP122-201ENST00000515923 296 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 MRPS36P3-201ENST00000519284 130 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 NDUFS5P6-201ENST00000529136 295 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AL352979.3-201ENST00000553515 247 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 HMGB3P26-201ENST00000560051 582 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 RPL23AP97-201ENST00000568955 471 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 MIR3939-201ENST00000582614 106 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AC096586.1-201ENST00000610267 561 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AL353726.1-201ENST00000614041 1000 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AC120349.3-201ENST00000624377 529 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 MTND2P41-201ENST00000637599 773 ntBASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.64□□□□□ -1.67
SNX9Q9Y5X1 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 RNU6-543P-201ENST00000362576 108 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 RNA5SP27-201ENST00000363839 119 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 RNA5SP366-201ENST00000365454 123 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 RNU4-31P-201ENST00000384211 141 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 MIR142-201ENST00000384835 87 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 MIR1911-201ENST00000410783 80 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 MFSD13B-201ENST00000420133 1290 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC005005.2-201ENST00000420779 380 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms