Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC146944.4-201ENST00000602697 718 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AC128687.1-201ENST00000605304 619 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AC080013.4-201ENST00000607624 649 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 RNU6-156P-201ENST00000621869 107 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AC011755.1-201ENST00000623763 2049 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AL122126.1-201ENST00000546905 1318 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 Z95331.1-201ENST00000623075 23112 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 BTBD10P1-201ENST00000549824 1352 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC103591.2-201ENST00000265259 766 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC008549.2-201ENST00000333482 706 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 RNU6-501P-201ENST00000364072 100 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AL133388.1-201ENST00000404509 287 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AL590762.4-201ENST00000425885 253 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AL512649.1-201ENST00000428997 581 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AL772161.1-201ENST00000439130 476 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AL512286.1-201ENST00000439244 400 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC02210-201ENST00000444561 288 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC073850.1-201ENST00000449243 255 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 OR6C5P-201ENST00000452388 923 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 ZNF114P1-201ENST00000453500 292 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 snoU13.7-201ENST00000459220 104 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC068724.1-201ENST00000487100 792 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 RNF138P1-201ENST00000502765 546 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC091965.2-201ENST00000512324 613 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 MTND5P4-201ENST00000514978 288 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 HSPA8P13-201ENST00000523715 472 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC068587.4-201ENST00000533893 186 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AGGF1P8-201ENST00000562979 1000 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC124068.1-201ENST00000563131 678 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC008759.1-201ENST00000589783 983 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC133644.2-201ENST00000608142 540 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 Mico1.1-201ENST00000611698 204 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC01739-205ENST00000641890 573 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 SAGE4P-201ENST00000442271 3381 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 AC025574.1-201ENST00000554784 1653 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 MTCO1P23-201ENST00000415223 1526 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 CR383658.2-201ENST00000547576 1525 ntBASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA3Q9Y5H0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 AL022322.2-201ENST00000624072 20397 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 RNU1-43P-201ENST00000365052 165 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 SNORA51.6-201ENST00000384151 125 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 DUTP5-201ENST00000406790 469 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 AC069218.2-201ENST00000411665 344 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 NDUFB4P8-201ENST00000435351 367 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms