Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AC092593.2-201ENST00000513866 913 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 RNA5SP315-201ENST00000516340 116 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 RNA5SP312-201ENST00000517068 116 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 HIGD1AP18-201ENST00000520730 278 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 CKS1BP1-201ENST00000555221 240 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AC099489.2-201ENST00000574976 260 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AC004775.1-201ENST00000607389 753 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AC124312.6-202ENST00000623624 418 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AC009501.3-201ENST00000605001 1352 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 AL359715.4-201ENST00000606629 1436 ntBASIC3.6□□□□□ -1.83
TRAPPC4Q9Y296 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 RNU4-74P-201ENST00000411280 161 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 RPL7AP73-201ENST00000413490 353 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 RPS27AP12-201ENST00000429552 465 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 HSFY6P-201ENST00000445573 403 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 HMGB1P5-202ENST00000451497 985 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AL645939.1-201ENST00000453429 797 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 CABYRP1-201ENST00000465493 1045 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AC007688.1-201ENST00000475592 759 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AC093663.2-201ENST00000484625 313 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AC068305.1-201ENST00000497406 726 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AC108471.1-201ENST00000513977 287 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 MIR2116-201ENST00000517221 80 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AP003168.1-201ENST00000530091 307 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AC007424.1-203ENST00000554613 687 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AL121576.1-201ENST00000556055 276 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AC005242.1-201ENST00000585658 438 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 OR4H6P-202ENST00000603819 340 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AC092653.1-201ENST00000608509 531 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AC006946.3-201ENST00000609791 756 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AC073592.7-201ENST00000623659 507 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 MAPK10-372ENST00000641954 3413 ntBASIC3.59□□□□□ -1.83
TRAPPC4Q9Y296 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TRAPPC4Q9Y296 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
TRAPPC4Q9Y296 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.59□□□□□ -1.84
TRAPPC4Q9Y296 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TRAPPC4Q9Y296 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 MIR92A2-201ENST00000385299 75 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 MTATP6P19-201ENST00000413797 659 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AC083863.1-201ENST00000438811 231 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 HMGB1P37-201ENST00000439613 609 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 DNAJC19P1-201ENST00000455312 319 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AC004801.2-202ENST00000463559 283 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 RPL7L1P8-201ENST00000469911 741 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 RPS3AP6-201ENST00000484430 795 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AL132838.2-201ENST00000492041 314 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AC020593.1-201ENST00000507399 299 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 SETP12-201ENST00000514068 805 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms