Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AP000473.2-201ENST00000602659 1537 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 RNA5SP132-201ENST00000364725 118 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 RNU6-1068P-201ENST00000410958 103 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 RN7SKP247-201ENST00000411094 308 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 RNU6-195P-201ENST00000411352 109 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 DNAJC19P7-201ENST00000428811 344 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AL160004.2-201ENST00000432935 350 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AC132479.1-201ENST00000449160 144 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AC128716.1-201ENST00000475129 166 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 RPS3AP50-201ENST00000487064 803 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 RNU6-635P-201ENST00000516651 102 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AP000827.1-201ENST00000527814 258 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 BNIP3P16-201ENST00000589779 534 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AP005431.1-201ENST00000618479 319 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AC132825.6-201ENST00000638861 357 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 GNL2P1-201ENST00000451274 2190 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 ASNSP3-201ENST00000451989 1306 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 NMD3P1-201ENST00000439704 1488 ntBASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
PDZRN3Q9UPQ7 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AC007159.1-201ENST00000566529 4706 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 Y_RNA.187-201ENST00000363918 113 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 RPL7P58-201ENST00000402913 758 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AL356968.1-201ENST00000416622 474 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 OR5W1P-201ENST00000423705 938 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AC096644.2-201ENST00000429278 159 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AL731534.1-201ENST00000434711 269 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AC012512.1-201ENST00000446594 718 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 HMGB1P16-201ENST00000447155 540 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AL445466.1-201ENST00000448432 357 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AC083798.1-201ENST00000472671 131 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 TRBV8-1-201ENST00000481590 279 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AC025164.1-201ENST00000496249 478 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 RNA5SP362-201ENST00000516048 118 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AC011816.2-201ENST00000607089 556 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AC100812.1-201ENST00000607622 580 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AC093913.1-201ENST00000614178 329 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 MIR6730-201ENST00000622213 67 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AC093591.3-201ENST00000634516 308 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AL731532.1-201ENST00000623972 4236 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 API5P2-201ENST00000397055 1498 ntBASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PDZRN3Q9UPQ7 AL359091.1-201ENST00000449048 1734 ntBASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.66□□□□□ -1.18
PDZRN3Q9UPQ7 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms