Protein–RNA interactions for Protein: Q9UKV5

AMFR, E3 ubiquitin-protein ligase AMFR, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMFRQ9UKV5 AL391994.1-201ENST00000254724 282 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 HMGB1P5-201ENST00000255320 642 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 Y_RNA.77-201ENST00000362962 107 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 U8.4-201ENST00000363626 134 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 GSTA8P-201ENST00000404253 637 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 MIR1178-201ENST00000408396 91 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AL031779.1-201ENST00000415663 330 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 DPRXP1-201ENST00000426312 460 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 RPL21P110-201ENST00000433345 446 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 KCTD10P1-201ENST00000434203 625 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 UBE2V1P5-201ENST00000440070 405 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AC092809.1-201ENST00000441469 474 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AL360221.1-201ENST00000445989 335 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AL589765.3-201ENST00000446084 462 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 RPL5P24-201ENST00000463742 885 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 CCDC75P1-201ENST00000469247 791 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 RPL21P6-201ENST00000479171 504 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AC012158.1-204ENST00000483430 465 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 HSPE1P23-201ENST00000509838 286 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 RNA5SP92-201ENST00000516437 110 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AC007115.1-201ENST00000546853 234 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AC125612.1-201ENST00000547580 377 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 BPTFP1-201ENST00000579209 492 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 FP325313.1-201ENST00000638228 703 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 SAMMSON-226ENST00000642089 1582 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AC025263.3-201ENST00000622965 1396 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 AC087359.1-201ENST00000508335 1740 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.89□□□□□ -1.63
AMFRQ9UKV5 RBPJP2-201ENST00000618187 1444 ntBASIC4.89□□□□□ -1.63
AMFRQ9UKV5 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 AC005539.1-201ENST00000443768 1479 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 C4BPAP1-201ENST00000415474 1893 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 SNORA74A-201ENST00000364089 198 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 Y_RNA.560-201ENST00000384689 102 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 RNA5SP146-201ENST00000410743 123 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 AC019050.1-201ENST00000418508 492 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 PDSS1P1-201ENST00000422953 1114 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 DLGAP5P1-201ENST00000430307 464 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 RPS7P5-201ENST00000441482 581 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 TAF9P1-201ENST00000445421 515 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 TPTE2P6-202ENST00000445572 1007 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 H2AFZP5-201ENST00000446960 382 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 MTCO2P25-201ENST00000447065 681 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 TAF9P2-201ENST00000454958 515 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 VPS26AP1-201ENST00000483197 979 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 IGBP1P5-201ENST00000507524 1000 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 STMN1P2-201ENST00000508435 439 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 HMGB3P13-201ENST00000511263 607 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 AC109445.1-201ENST00000512356 383 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 RPL12P22-201ENST00000519073 490 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 OR5AZ1P-201ENST00000527448 943 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 AL137072.1-201ENST00000603444 466 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 AC073114.1-201ENST00000612027 490 ntBASIC4.88□□□□□ -1.63
AMFRQ9UKV5 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.88□□□□□ -1.63
AMFRQ9UKV5 AL121612.2-201ENST00000612261 482 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms