Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 Y_RNA.202-201ENST00000364083 110 ntBASIC8.4□□□□□ -1.06
RTN4Q9NQC3 RNU6-173P-201ENST00000364215 104 ntBASIC8.4□□□□□ -1.06
RTN4Q9NQC3 RNU6-128P-201ENST00000383976 107 ntBASIC8.4□□□□□ -1.06
RTN4Q9NQC3 NONOP2-201ENST00000414613 1231 ntBASIC8.4□□□□□ -1.06
RTN4Q9NQC3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 ANAPC1P1-201ENST00000426186 2145 ntBASIC8.4□□□□□ -1.06
RTN4Q9NQC3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 RNA5SP460-201ENST00000516789 100 ntBASIC8.4□□□□□ -1.06
RTN4Q9NQC3 RNU6-273P-201ENST00000516937 96 ntBASIC8.4□□□□□ -1.06
RTN4Q9NQC3 RANP9-201ENST00000519957 271 ntBASIC8.4□□□□□ -1.06
RTN4Q9NQC3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 AC012182.1-201ENST00000570133 895 ntBASIC8.4□□□□□ -1.06
RTN4Q9NQC3 AC011447.2-201ENST00000592921 283 ntBASIC8.4□□□□□ -1.06
RTN4Q9NQC3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 AC006924.1-201ENST00000610750 559 ntBASIC8.4□□□□□ -1.06
RTN4Q9NQC3 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 AL118522.2-201ENST00000616045 615 ntBASIC8.4□□□□□ -1.06
RTN4Q9NQC3 AC073592.6-201ENST00000624271 415 ntBASIC8.4□□□□□ -1.06
RTN4Q9NQC3 FKBP1AP4-201ENST00000631775 336 ntBASIC8.4□□□□□ -1.06
RTN4Q9NQC3 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 LINC02495-203ENST00000636704 242 ntBASIC8.4□□□□□ -1.06
RTN4Q9NQC3 MTND5P42-201ENST00000637720 498 ntBASIC8.4□□□□□ -1.06
RTN4Q9NQC3 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RTN4Q9NQC3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
RTN4Q9NQC3 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
RTN4Q9NQC3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
RTN4Q9NQC3 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
RTN4Q9NQC3 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
RTN4Q9NQC3 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 RIT1-201ENST00000368322 855 ntTSL 3 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 MIR559-201ENST00000385188 96 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 AC074254.1-201ENST00000399152 404 ntTSL 5 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 BX682237.1-201ENST00000415016 335 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 RPLP0P7-201ENST00000416050 667 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 PPIAP25-201ENST00000420177 540 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 FAR2P4-202ENST00000425399 584 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 H2AFZP5-201ENST00000446960 382 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 Y_RNA.631-201ENST00000459607 101 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 HMGB3P15-201ENST00000507326 574 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 RN7SKP24-201ENST00000515888 284 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 Y_RNA.689-201ENST00000516589 107 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 AP005639.2-201ENST00000527592 928 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 AL133304.3-201ENST00000550089 477 ntTSL 3 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 MTCO3P23-201ENST00000561363 289 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 MIR5095-201ENST00000578844 88 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 AC080078.3-201ENST00000605407 463 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 AC008013.2-202ENST00000637965 364 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 AC026523.2-201ENST00000625039 7739 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 AC087516.1-201ENST00000561236 2428 ntBASIC8.39□□□□□ -1.07
RTN4Q9NQC3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RTN4Q9NQC3 OLFM5P-201ENST00000411807 1478 ntBASIC8.38□□□□□ -1.07
RTN4Q9NQC3 AL359976.1-201ENST00000418655 3528 ntBASIC8.38□□□□□ -1.07
RTN4Q9NQC3 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 RNU6-593P-201ENST00000364716 112 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms