Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 MTCYBP3-201ENST00000445588 1137 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 AC104651.2-201ENST00000447549 528 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 OR1H1P-201ENST00000448731 937 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 AC243772.1-201ENST00000451620 410 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 NDUFA12P1-201ENST00000455914 406 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 CCDC75P1-201ENST00000469247 791 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 MTND3P7-201ENST00000474435 343 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 OR2A20P-203ENST00000498397 1268 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 OR7H2P-201ENST00000513483 306 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 AC134698.5-201ENST00000519444 336 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 AC068714.1-201ENST00000559623 800 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 MIR4697-201ENST00000582977 78 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 MIR4999-201ENST00000585029 91 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 NBR2-204ENST00000587322 63 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 VN1R90P-201ENST00000595717 726 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 AL451074.6-201ENST00000608512 729 ntBASIC4.88□□□□□ -1.63
USP29Q9HBJ7 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.88□□□□□ -1.63
USP29Q9HBJ7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AC104118.1-201ENST00000607625 1589 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AL672167.1-203ENST00000641299 2975 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AC107068.1-201ENST00000563286 4218 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AL355852.1-201ENST00000454081 1771 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 RNU1-32P-201ENST00000363937 159 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 RNU6-304P-201ENST00000364855 107 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 RNU6-317P-201ENST00000384031 107 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 MIR217-201ENST00000384817 110 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 RNU2-6P-201ENST00000411404 190 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 OR51A3P-201ENST00000413596 924 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AL139421.1-201ENST00000423010 169 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AC234781.2-201ENST00000426370 994 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 USP9YP31-201ENST00000431405 881 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 RPL21P110-201ENST00000433345 446 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 COX6CP18-201ENST00000448769 222 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AC097262.1-201ENST00000452559 548 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AL354710.1-201ENST00000453641 246 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 RFC5P1-201ENST00000454419 874 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AURKAPS2-201ENST00000454983 333 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 RNU6-1218P-201ENST00000458990 108 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 RPL5P24-201ENST00000463742 885 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 DEFB109F-201ENST00000491870 277 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AC008897.1-201ENST00000494006 347 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 DYNLL1P6-201ENST00000503440 264 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 WBP1LP4-201ENST00000505043 344 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 MTCYBP16-201ENST00000509187 1129 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 XKRY-201ENST00000510392 1100 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AC117532.1-201ENST00000514638 323 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 RNA5SP360-201ENST00000516555 118 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 RNU6-759P-201ENST00000516740 103 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 RNU6-232P-201ENST00000517144 64 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 OR5AN2P-201ENST00000534535 896 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 HIGD1AP17-201ENST00000554576 276 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 BPTFP1-201ENST00000579209 492 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AC209154.1-201ENST00000582156 337 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AC090616.2-202ENST00000584248 222 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 MIR378J-201ENST00000611988 109 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AC092140.2-201ENST00000618027 521 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms