Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 RNU6-796P-201ENST00000391086 107 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 AL606495.1-201ENST00000422100 813 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 RPL21P109-201ENST00000422213 475 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 FHP1-201ENST00000442741 703 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 RPL21P11-201ENST00000461458 483 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 AC108475.1-201ENST00000507880 950 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 RFPL1S-203ENST00000539579 330 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 MIR4715-201ENST00000584117 79 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 AC110743.1-201ENST00000584870 478 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 AC020910.2-201ENST00000603635 610 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 AL096803.3-201ENST00000609032 532 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 MIR6868-201ENST00000611215 58 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 AC018926.1-201ENST00000616335 435 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 CASC19-284ENST00000642142 1868 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 MTND4P10-201ENST00000446199 1363 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 MFSD8-216ENST00000641147 4009 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 MIR383-201ENST00000362257 73 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 RNA5SP505-201ENST00000364748 108 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 RNA5SP366-201ENST00000365454 123 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 RNU11-4P-201ENST00000391149 133 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 BX664727.1-201ENST00000416024 466 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 VN1R42P-201ENST00000424651 344 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AC115285.1-201ENST00000424879 736 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 FO393414.1-201ENST00000428697 1184 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 Z80107.1-201ENST00000436830 412 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AL138878.2-201ENST00000440581 1241 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AC005229.2-201ENST00000456995 399 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 RPL5P13-201ENST00000462840 709 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 RN7SL303P-201ENST00000469773 251 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AL132838.2-201ENST00000492041 314 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AC008802.1-201ENST00000519121 791 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AC015849.2-201ENST00000605738 409 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AC026741.1-201ENST00000605892 482 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AC116651.1-201ENST00000609724 556 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AC019193.2-201ENST00000610012 634 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 MIR7703-201ENST00000620784 77 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AC073342.3-201ENST00000624211 193 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 OR6C71P-202ENST00000641886 1107 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 HSPA8P1-201ENST00000425843 1833 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AC090971.4-201ENST00000560291 1800 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 AC012618.3-205ENST00000637896 1496 ntBASIC4.73□□□□□ -1.65
UPF2Q9HAU5 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
UPF2Q9HAU5 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 RNU6-398P-201ENST00000384143 109 ntBASIC4.72□□□□□ -1.65
UPF2Q9HAU5 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 GSTA12P-201ENST00000402398 508 ntBASIC4.72□□□□□ -1.65
UPF2Q9HAU5 NCSTNP1-201ENST00000406229 144 ntBASIC4.72□□□□□ -1.65
UPF2Q9HAU5 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms