Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
BCAS3Q9H6U6 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BCAS3Q9H6U6 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.71□□□□□ -1.5
BCAS3Q9H6U6 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 BCORP1-203ENST00000513194 5093 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 XGY1-201ENST00000381172 446 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 RNU6-1011P-201ENST00000384668 107 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 SNORD115-47-201ENST00000391226 86 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 SNORA11C-201ENST00000408532 129 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 RNU6-248P-201ENST00000410720 107 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AF186996.5-201ENST00000418098 904 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 RPL7P11-201ENST00000437586 658 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC112498.1-201ENST00000444401 332 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 TPT1P14-201ENST00000448018 505 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC146507.1-201ENST00000468335 354 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 RPL7P38-201ENST00000488396 739 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 RPS4XP15-201ENST00000489210 795 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 OR5H5P-201ENST00000503164 928 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC093815.1-201ENST00000508637 280 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC098799.2-201ENST00000509466 868 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 SNORA20.3-201ENST00000516880 132 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 RNA5SP392-201ENST00000516905 112 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC006960.3-201ENST00000561845 705 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC022884.2-201ENST00000578535 580 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 MTCYBP13-201ENST00000578634 1093 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC125494.2-201ENST00000602431 657 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 RNA5SP439-201ENST00000617595 124 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AP000648.2-201ENST00000624182 404 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AP005264.7-201ENST00000625003 745 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 DCAF13P3-201ENST00000561147 1334 ntBASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BCAS3Q9H6U6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 AP005432.1-201ENST00000580891 3485 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 RPL21P132-201ENST00000331267 462 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 RNU5D-1-201ENST00000363299 116 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 RN7SKP153-201ENST00000365026 316 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 RNA5SP88-201ENST00000365560 109 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 Y_RNA.450-201ENST00000384198 113 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 RNU6-244P-201ENST00000391028 104 ntBASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
BCAS3Q9H6U6 U3.32-201ENST00000408116 212 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms