Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 ZNF542P-204ENST00000482727 1305 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 RN7SKP227-201ENST00000364445 330 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 MIR195-201ENST00000385194 87 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 RNU6-932P-201ENST00000391108 106 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 RNA5SP105-201ENST00000391123 113 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AL034403.1-201ENST00000399414 885 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AF274854.1-201ENST00000413236 615 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 RPL21P108-201ENST00000413857 481 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 RGS17P1-201ENST00000423358 553 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 FTH1P16-201ENST00000435241 552 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 RPS26P2-201ENST00000440331 348 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 EXTL2P1-201ENST00000446218 416 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 SEPT14P24-201ENST00000447236 180 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AL589880.1-201ENST00000448271 287 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AL591623.2-201ENST00000449978 222 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 RPL7AP28-201ENST00000464513 571 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 RPL23AP37-201ENST00000479658 549 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 RN7SL817P-201ENST00000480777 288 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 RPS27AP16-201ENST00000492222 470 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AC015795.1-201ENST00000513669 327 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 SNORA31.13-201ENST00000516624 135 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AC023813.2-201ENST00000564321 469 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AC010546.1-201ENST00000569391 485 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AC012254.4-201ENST00000588843 273 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AL020997.2-201ENST00000602607 184 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AP001981.2-201ENST00000603241 418 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AL606537.1-201ENST00000607258 2011 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AC019131.2-201ENST00000609071 870 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 TUSC7.1-201ENST00000610969 165 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AL450489.1-201ENST00000612071 468 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 MIR6716-201ENST00000613413 80 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AC011815.3-201ENST00000624194 473 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 AC068724.3-201ENST00000625906 87 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 DHX9P1-201ENST00000436565 3076 ntBASIC4.76□□□□□ -1.65
EBF3Q9H4W6 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
EBF3Q9H4W6 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC093775.1-201ENST00000624154 1868 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AP000542.2-201ENST00000623199 6179 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC017104.4-201ENST00000636283 1592 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC092104.1-201ENST00000497346 1441 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC005832.2-201ENST00000538921 1430 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 RNU4-44P-201ENST00000363050 141 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 RNU1-83P-201ENST00000363426 164 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 U6.112-201ENST00000384129 70 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 SNORD116-12-201ENST00000384468 92 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 RPL23AP59-201ENST00000399415 461 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 ARL4AP5-201ENST00000404372 599 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AL356387.2-201ENST00000422272 243 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AC093084.1-201ENST00000424233 687 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 GTF2IP2-201ENST00000424290 697 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 ETF1P3-201ENST00000430422 1160 ntBASIC4.75□□□□□ -1.65
EBF3Q9H4W6 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms