Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MFSD8-236ENST00000641509 4050 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 RNA5SP105-201ENST00000391123 113 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 BOLA3P4-201ENST00000418151 400 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 AC093698.1-201ENST00000423843 571 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 HSFY1P1-201ENST00000423928 1178 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 AC244033.1-201ENST00000426826 870 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 RPS26P47-201ENST00000427219 348 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 RPL7P4-203ENST00000430239 730 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 RPS20P1-201ENST00000434853 354 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 NOTCH2P1-201ENST00000443481 624 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 FTH1P25-201ENST00000447665 469 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 UBDP1-202ENST00000457888 382 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 AC010307.1-201ENST00000467206 836 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 RN7SL323P-201ENST00000494712 295 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 RN7SKP141-201ENST00000516167 338 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 RN7SKP209-201ENST00000516888 304 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 RFPL1S-203ENST00000539579 330 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 AC008011.1-201ENST00000545989 227 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 AL357559.1-201ENST00000622228 274 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 AP003072.5-201ENST00000623872 773 ntBASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.45□□□□□ -1.7
UPF3BQ9BZI7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 CASC19-284ENST00000642142 1868 ntBASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 RN7SKP44-201ENST00000363602 316 ntBASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 SNORA73.2-201ENST00000364946 201 ntBASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 RNU6-233P-201ENST00000410845 141 ntBASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 SNORA57.3-201ENST00000411095 141 ntBASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 AC096644.3-201ENST00000416788 338 ntBASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 OR8X1P-201ENST00000534542 869 ntBASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 AC141257.3-201ENST00000572906 215 ntBASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 AL121772.2-201ENST00000614331 297 ntBASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 AL354798.1-201ENST00000622505 329 ntBASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 AC009093.8-201ENST00000641769 292 ntBASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UPF3BQ9BZI7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 RNU2-65P-201ENST00000410162 185 ntBASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 Z92545.1-201ENST00000411782 234 ntBASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 AL645931.1-201ENST00000439737 410 ntBASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 AL139099.1-201ENST00000497398 403 ntBASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 GMPSP1-201ENST00000514075 579 ntBASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 DEFB109D-201ENST00000529497 240 ntBASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 AC135001.1-201ENST00000544546 283 ntBASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 AC091515.1-201ENST00000548110 679 ntBASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 AL121576.1-201ENST00000556055 276 ntBASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 AC015911.5-201ENST00000587076 451 ntBASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.43□□□□□ -1.7
UPF3BQ9BZI7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 RNU4-7P-201ENST00000364758 141 ntBASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 PTMAP5-201ENST00000393073 333 ntBASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 AL136131.1-201ENST00000406079 803 ntBASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 OR4F13P-201ENST00000428478 931 ntBASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 PPIAP17-201ENST00000438507 471 ntBASIC4.42□□□□□ -1.7
UPF3BQ9BZI7 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms