Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 RNU4-23P-201ENST00000362839 140 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 RNU6-628P-201ENST00000410675 107 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AL139247.1-201ENST00000422768 325 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AC093698.1-201ENST00000423843 571 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AL050321.1-201ENST00000432363 400 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 PPIAP17-201ENST00000438507 471 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AC006326.1-201ENST00000445465 787 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 EXTL2P1-201ENST00000446218 416 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AC005798.1-201ENST00000513715 387 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 RN7SKP83-201ENST00000516512 178 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 IGKV2-23-201ENST00000518729 323 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AC092851.1-201ENST00000535964 478 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AC008011.1-201ENST00000545989 227 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AC067805.1-201ENST00000559344 470 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 VN1R84P-201ENST00000593697 235 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AC245128.3-201ENST00000594721 748 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AC244205.2-202ENST00000635781 342 ntBASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 MFSD8-236ENST00000641509 4050 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 RNA5SP171-201ENST00000391071 115 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 AC017079.2-201ENST00000416102 485 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 AC074367.1-201ENST00000438685 1125 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 RRM2P4-201ENST00000441721 562 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 VN1R34P-201ENST00000447387 883 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 AL162151.2-201ENST00000448875 158 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 SNRPGP5-201ENST00000456003 220 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 OR9M1P-201ENST00000459641 921 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 RPL21P11-201ENST00000461458 483 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 RN7SL132P-201ENST00000478131 296 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 TPT1P3-201ENST00000492841 512 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 SMARCE1P4-201ENST00000523647 241 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 SNRPGP1-201ENST00000553864 222 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 AC068714.1-201ENST00000559623 800 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 AC120057.2-201ENST00000571520 271 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 AC053481.3-201ENST00000577881 843 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 MIR4286-201ENST00000580651 93 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 AC083899.3-201ENST00000603413 594 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 AC110741.2-201ENST00000605278 268 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 AC009318.3-201ENST00000616916 503 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 AC104820.1-201ENST00000624183 307 ntBASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.45□□□□□ -1.86
RSPO3Q9BXY4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AC090229.1-201ENST00000590983 1609 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms