Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.73□□□□□ -1.49
IFT140Q96RY7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
IFT140Q96RY7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
IFT140Q96RY7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.73□□□□□ -1.49
IFT140Q96RY7 AC096638.2-201ENST00000434965 711 ntBASIC5.73□□□□□ -1.49
IFT140Q96RY7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.73□□□□□ -1.49
IFT140Q96RY7 AC023598.1-201ENST00000472521 361 ntBASIC5.73□□□□□ -1.49
IFT140Q96RY7 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.73□□□□□ -1.49
IFT140Q96RY7 PPBPP1-201ENST00000510807 373 ntBASIC5.73□□□□□ -1.49
IFT140Q96RY7 RNA5SP356-201ENST00000515972 94 ntBASIC5.73□□□□□ -1.49
IFT140Q96RY7 AC092868.3-201ENST00000560515 784 ntBASIC5.73□□□□□ -1.49
IFT140Q96RY7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.73□□□□□ -1.49
IFT140Q96RY7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
IFT140Q96RY7 Z95331.1-201ENST00000623075 23112 ntBASIC5.73□□□□□ -1.49
IFT140Q96RY7 TNPO1P3-201ENST00000436471 2662 ntBASIC5.73□□□□□ -1.49
IFT140Q96RY7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
IFT140Q96RY7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.72□□□□□ -1.49
IFT140Q96RY7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
IFT140Q96RY7 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
IFT140Q96RY7 RPL23AP69-201ENST00000431134 458 ntBASIC5.72□□□□□ -1.49
IFT140Q96RY7 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.72□□□□□ -1.49
IFT140Q96RY7 AC239809.1-201ENST00000450470 217 ntBASIC5.72□□□□□ -1.49
IFT140Q96RY7 DNAJC19P8-201ENST00000452887 259 ntBASIC5.72□□□□□ -1.49
IFT140Q96RY7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.72□□□□□ -1.49
IFT140Q96RY7 RPL7L1P13-201ENST00000511702 739 ntBASIC5.72□□□□□ -1.49
IFT140Q96RY7 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
IFT140Q96RY7 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
IFT140Q96RY7 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.72□□□□□ -1.49
IFT140Q96RY7 RNVU1-4-201ENST00000612985 164 ntBASIC5.72□□□□□ -1.49
IFT140Q96RY7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
IFT140Q96RY7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
IFT140Q96RY7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.72□□□□□ -1.49
IFT140Q96RY7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
IFT140Q96RY7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
IFT140Q96RY7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
IFT140Q96RY7 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
IFT140Q96RY7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
IFT140Q96RY7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
IFT140Q96RY7 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
IFT140Q96RY7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
IFT140Q96RY7 OR5H2-201ENST00000355273 945 ntBASIC5.71□□□□□ -1.49
IFT140Q96RY7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
IFT140Q96RY7 RSL24D1P1-201ENST00000404972 493 ntBASIC5.71□□□□□ -1.49
IFT140Q96RY7 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.71□□□□□ -1.49
IFT140Q96RY7 NPM1P25-201ENST00000429734 854 ntBASIC5.71□□□□□ -1.49
IFT140Q96RY7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.71□□□□□ -1.49
IFT140Q96RY7 HMGB1P5-202ENST00000451497 985 ntBASIC5.71□□□□□ -1.49
IFT140Q96RY7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.71□□□□□ -1.49
IFT140Q96RY7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.71□□□□□ -1.49
IFT140Q96RY7 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
IFT140Q96RY7 AC018442.3-201ENST00000523025 183 ntBASIC5.71□□□□□ -1.49
IFT140Q96RY7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC5.71□□□□□ -1.49
IFT140Q96RY7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.71□□□□□ -1.49
IFT140Q96RY7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
IFT140Q96RY7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
IFT140Q96RY7 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
IFT140Q96RY7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
IFT140Q96RY7 HDGFP1-201ENST00000405943 252 ntBASIC5.71□□□□□ -1.5
IFT140Q96RY7 HMGN1P24-201ENST00000412282 298 ntBASIC5.71□□□□□ -1.5
IFT140Q96RY7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.71□□□□□ -1.5
IFT140Q96RY7 HMGB3P9-201ENST00000441799 583 ntBASIC5.71□□□□□ -1.5
IFT140Q96RY7 AC021678.1-201ENST00000505195 936 ntBASIC5.71□□□□□ -1.5
IFT140Q96RY7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.71□□□□□ -1.5
IFT140Q96RY7 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.71□□□□□ -1.5
IFT140Q96RY7 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.71□□□□□ -1.5
IFT140Q96RY7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
IFT140Q96RY7 AC005183.1-201ENST00000603687 1979 ntBASIC5.7□□□□□ -1.5
IFT140Q96RY7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
IFT140Q96RY7 CEP170P1-201ENST00000502249 4587 ntBASIC5.7□□□□□ -1.5
IFT140Q96RY7 TCP1P3-201ENST00000414406 1498 ntBASIC5.7□□□□□ -1.5
IFT140Q96RY7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
IFT140Q96RY7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
IFT140Q96RY7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
IFT140Q96RY7 AC018529.3-201ENST00000624212 2254 ntBASIC5.7□□□□□ -1.5
IFT140Q96RY7 HSPE1P16-201ENST00000426640 348 ntBASIC5.7□□□□□ -1.5
IFT140Q96RY7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
IFT140Q96RY7 UBTFL9-201ENST00000534504 1148 ntBASIC5.7□□□□□ -1.5
IFT140Q96RY7 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
IFT140Q96RY7 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.7□□□□□ -1.5
IFT140Q96RY7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.7□□□□□ -1.5
IFT140Q96RY7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.7□□□□□ -1.5
IFT140Q96RY7 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.7□□□□□ -1.5
IFT140Q96RY7 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.7□□□□□ -1.5
IFT140Q96RY7 AC067852.3-201ENST00000589177 561 ntBASIC5.7□□□□□ -1.5
IFT140Q96RY7 BNIP3P41-202ENST00000616656 861 ntBASIC5.7□□□□□ -1.5
IFT140Q96RY7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
IFT140Q96RY7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
IFT140Q96RY7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
IFT140Q96RY7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
IFT140Q96RY7 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
IFT140Q96RY7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.69□□□□□ -1.5
IFT140Q96RY7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
IFT140Q96RY7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
IFT140Q96RY7 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
IFT140Q96RY7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
IFT140Q96RY7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
IFT140Q96RY7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
IFT140Q96RY7 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
IFT140Q96RY7 IL6STP1-201ENST00000346911 1020 ntBASIC5.69□□□□□ -1.5
IFT140Q96RY7 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms