Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNA5-8SP7-201ENST00000363443 155 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 RNA5SP509-201ENST00000364577 119 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 MIR199A2-201ENST00000385289 110 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 AL133270.1-201ENST00000402635 279 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 ELOCP19-201ENST00000411919 318 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 TRGV6-201ENST00000417928 299 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 DNAJC19P7-201ENST00000428811 344 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 AL158071.1-201ENST00000430315 461 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 MTCO1P43-201ENST00000431831 488 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 AL138878.2-201ENST00000440581 1241 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 AP002371.1-201ENST00000463604 433 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 AC084198.1-201ENST00000477747 402 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 AC041039.1-201ENST00000485656 536 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 AC013356.1-201ENST00000489027 564 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 FABP5P12-201ENST00000515543 389 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 MIR4738-201ENST00000579134 87 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 AL365400.2-201ENST00000605604 902 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 AL354760.1-201ENST00000608357 643 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 AC243654.2-201ENST00000612843 443 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 AC092184.1-201ENST00000625042 715 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 AL079305.1-201ENST00000623159 3008 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 RNVU1-6-201ENST00000364688 164 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 RNA5SP505-201ENST00000364748 108 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 RNA5SP97-201ENST00000365006 84 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 ENSAP1-201ENST00000392855 326 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 RPS26P8-201ENST00000393490 348 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 RNU6-55P-201ENST00000411092 107 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 RNU6-954P-201ENST00000411355 107 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 RNA5SP107-201ENST00000411358 122 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC245291.1-201ENST00000419501 328 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AL590762.4-201ENST00000425885 253 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AL691449.1-201ENST00000426570 421 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 MOB1AP1-201ENST00000430903 535 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 SNORA71B-202ENST00000439232 272 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 NPM1P49-201ENST00000448027 714 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 RPS11P1-201ENST00000451072 473 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 OR2AF1P-201ENST00000454899 889 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC117394.1-201ENST00000477323 567 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC110792.1-201ENST00000491826 472 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC093720.1-201ENST00000505681 714 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 RNA5SP164-201ENST00000516533 110 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 RNA5SP179-201ENST00000517284 121 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC138701.1-201ENST00000524329 714 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 OR4U1P-201ENST00000554958 912 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC006116.5-201ENST00000591936 559 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 KLKP1-201ENST00000595979 403 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AP000894.4-201ENST00000610185 483 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC100827.5-201ENST00000615883 426 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 uc_338.9-201ENST00000617424 182 ntBASIC2.78□□□□□ -1.96
AP1S3Q96PC3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 API5-210ENST00000534600 1760 ntTSL 5 BASIC2.78□□□□□ -1.96
AP1S3Q96PC3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
AP1S3Q96PC3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.97
AP1S3Q96PC3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms