Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL158156.1-201ENST00000422509 473 ntBASIC4.96□□□□□ -1.62
USP47Q96K76 AC002075.2-201ENST00000425207 252 ntBASIC4.96□□□□□ -1.62
USP47Q96K76 OSTCP5-201ENST00000425293 453 ntBASIC4.96□□□□□ -1.62
USP47Q96K76 DPY19L1P2-201ENST00000426647 915 ntBASIC4.96□□□□□ -1.62
USP47Q96K76 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.96□□□□□ -1.62
USP47Q96K76 HMGB3P9-201ENST00000441799 583 ntBASIC4.96□□□□□ -1.62
USP47Q96K76 AC099560.2-201ENST00000457554 255 ntBASIC4.96□□□□□ -1.62
USP47Q96K76 RPS3AP50-201ENST00000487064 803 ntBASIC4.96□□□□□ -1.62
USP47Q96K76 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.96□□□□□ -1.62
USP47Q96K76 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.96□□□□□ -1.62
USP47Q96K76 AC006946.3-201ENST00000609791 756 ntBASIC4.96□□□□□ -1.62
USP47Q96K76 AL392088.2-201ENST00000637607 285 ntBASIC4.96□□□□□ -1.62
USP47Q96K76 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.96□□□□□ -1.62
USP47Q96K76 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
USP47Q96K76 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.96□□□□□ -1.62
USP47Q96K76 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.95□□□□□ -1.62
USP47Q96K76 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USP47Q96K76 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
USP47Q96K76 MIR490-201ENST00000384865 128 ntBASIC4.95□□□□□ -1.62
USP47Q96K76 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.95□□□□□ -1.62
USP47Q96K76 AC006989.1-201ENST00000427212 131 ntBASIC4.95□□□□□ -1.62
USP47Q96K76 RPS29P31-201ENST00000446147 164 ntBASIC4.95□□□□□ -1.62
USP47Q96K76 U3.44-201ENST00000458938 192 ntBASIC4.95□□□□□ -1.62
USP47Q96K76 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.95□□□□□ -1.62
USP47Q96K76 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.95□□□□□ -1.62
USP47Q96K76 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USP47Q96K76 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.95□□□□□ -1.62
USP47Q96K76 AC067852.3-201ENST00000589177 561 ntBASIC4.95□□□□□ -1.62
USP47Q96K76 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.95□□□□□ -1.62
USP47Q96K76 AL451049.1-201ENST00000608672 497 ntBASIC4.95□□□□□ -1.62
USP47Q96K76 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.95□□□□□ -1.62
USP47Q96K76 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.95□□□□□ -1.62
USP47Q96K76 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
USP47Q96K76 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.95□□□□□ -1.62
USP47Q96K76 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.95□□□□□ -1.62
USP47Q96K76 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
USP47Q96K76 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP47Q96K76 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USP47Q96K76 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.95□□□□□ -1.62
USP47Q96K76 MFSD8-233ENST00000641482 4860 ntBASIC4.95□□□□□ -1.62
USP47Q96K76 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USP47Q96K76 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USP47Q96K76 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP47Q96K76 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.95□□□□□ -1.62
USP47Q96K76 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USP47Q96K76 RNU4-35P-201ENST00000362588 141 ntBASIC4.94□□□□□ -1.62
USP47Q96K76 AL391417.1-201ENST00000404100 426 ntBASIC4.94□□□□□ -1.62
USP47Q96K76 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP47Q96K76 AC073063.1-201ENST00000434352 607 ntBASIC4.94□□□□□ -1.62
USP47Q96K76 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.94□□□□□ -1.62
USP47Q96K76 BX510359.1-201ENST00000456973 237 ntBASIC4.94□□□□□ -1.62
USP47Q96K76 SETP6-201ENST00000479329 568 ntBASIC4.94□□□□□ -1.62
USP47Q96K76 AC016687.1-201ENST00000482574 353 ntBASIC4.94□□□□□ -1.62
USP47Q96K76 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.94□□□□□ -1.62
USP47Q96K76 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.94□□□□□ -1.62
USP47Q96K76 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.94□□□□□ -1.62
USP47Q96K76 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.94□□□□□ -1.62
USP47Q96K76 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.94□□□□□ -1.62
USP47Q96K76 MIR4298-201ENST00000584380 73 ntBASIC4.94□□□□□ -1.62
USP47Q96K76 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.94□□□□□ -1.62
USP47Q96K76 AC022149.2-201ENST00000621061 203 ntBASIC4.94□□□□□ -1.62
USP47Q96K76 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.94□□□□□ -1.62
USP47Q96K76 AC244258.1-201ENST00000637553 1071 ntBASIC4.94□□□□□ -1.62
USP47Q96K76 AC000123.3-201ENST00000624029 4975 ntBASIC4.94□□□□□ -1.62
USP47Q96K76 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
USP47Q96K76 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.94□□□□□ -1.62
USP47Q96K76 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.94□□□□□ -1.62
USP47Q96K76 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USP47Q96K76 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP47Q96K76 OR6K3-202ENST00000368146 996 ntBASIC4.93□□□□□ -1.62
USP47Q96K76 SNORD17-201ENST00000390930 237 ntBASIC4.93□□□□□ -1.62
USP47Q96K76 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.93□□□□□ -1.62
USP47Q96K76 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.93□□□□□ -1.62
USP47Q96K76 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.93□□□□□ -1.62
USP47Q96K76 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.93□□□□□ -1.62
USP47Q96K76 RN7SL601P-201ENST00000471221 293 ntBASIC4.93□□□□□ -1.62
USP47Q96K76 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
USP47Q96K76 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.93□□□□□ -1.62
USP47Q96K76 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.93□□□□□ -1.62
USP47Q96K76 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.93□□□□□ -1.62
USP47Q96K76 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.93□□□□□ -1.62
USP47Q96K76 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.93□□□□□ -1.62
USP47Q96K76 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.93□□□□□ -1.62
USP47Q96K76 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.93□□□□□ -1.62
USP47Q96K76 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.93□□□□□ -1.62
USP47Q96K76 AC020914.4-201ENST00000597690 277 ntBASIC4.93□□□□□ -1.62
USP47Q96K76 AC096586.2-201ENST00000610260 441 ntBASIC4.93□□□□□ -1.62
USP47Q96K76 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.93□□□□□ -1.62
USP47Q96K76 AC244205.2-202ENST00000635781 342 ntBASIC4.93□□□□□ -1.62
USP47Q96K76 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.93□□□□□ -1.62
USP47Q96K76 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP47Q96K76 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
USP47Q96K76 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.93□□□□□ -1.62
USP47Q96K76 MTND5P23-201ENST00000430812 1655 ntBASIC4.93□□□□□ -1.62
USP47Q96K76 OTUD4P1-201ENST00000237841 3067 ntBASIC4.93□□□□□ -1.62
USP47Q96K76 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP47Q96K76 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.92□□□□□ -1.62
USP47Q96K76 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP47Q96K76 AC234772.1-201ENST00000377927 937 ntBASIC4.92□□□□□ -1.62
USP47Q96K76 FTLP19-201ENST00000433300 394 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms