Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC090142.1-201ENST00000465776 462 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 RPL36AP51-201ENST00000487216 318 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 RN7SL214P-201ENST00000487317 265 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 FAM172BP-201ENST00000487497 1089 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC025458.1-201ENST00000506046 166 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC011411.1-201ENST00000509592 876 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC139365.2-201ENST00000517972 253 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AP003072.1-201ENST00000531740 145 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AP004609.2-201ENST00000532177 190 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC087477.6-201ENST00000559595 843 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC011712.1-201ENST00000588959 234 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AL162730.1-201ENST00000605734 292 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AL160413.1-201ENST00000622780 310 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 AL121839.2-201ENST00000565058 6943 ntBASIC5.38□□□□□ -1.55
NUP43Q8NFH3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
NUP43Q8NFH3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AL034546.1-201ENST00000623740 3693 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 OR5J1P-201ENST00000313544 939 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 RNU6-1322P-201ENST00000364309 107 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 RNU1-136P-201ENST00000384181 164 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AC087752.1-201ENST00000391360 558 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 HMGB1P17-201ENST00000403495 628 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 GAPDHP48-201ENST00000436626 961 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 HMGB3P12-201ENST00000438745 556 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 HMGN1P36-201ENST00000446623 298 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 RPL7AP52-201ENST00000458096 790 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 ACA64.1-201ENST00000459171 127 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AC094085.1-201ENST00000468914 584 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 DUTP1-201ENST00000493631 470 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AC074255.1-201ENST00000511259 501 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 MTND6P2-201ENST00000512226 524 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AC136777.2-201ENST00000522979 358 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 HMGN2P36-201ENST00000529541 409 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AC096996.1-201ENST00000563813 325 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AL161729.3-201ENST00000603533 673 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 YWHAQP7-201ENST00000603536 658 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AC013553.2-201ENST00000604244 589 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AC009027.1-201ENST00000604510 479 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AL158801.5-201ENST00000623123 465 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 TTC41P-205ENST00000551270 3963 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms