Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC010300.1-201ENST00000600671 5134 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 FAM133CP-201ENST00000332869 704 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 RNU4-51P-201ENST00000364206 140 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 RNA5SP44-201ENST00000410446 133 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 MTCO3P41-201ENST00000414801 328 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 RPL21P43-201ENST00000425440 472 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 IFNNP1-201ENST00000429219 553 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC005189.1-201ENST00000431286 310 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 AL132765.1-201ENST00000434165 553 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 AL358232.1-201ENST00000448030 501 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC239798.3-201ENST00000454459 408 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC244505.3-201ENST00000454598 187 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 RPS27AP17-201ENST00000463344 455 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 SNORA31.13-201ENST00000516624 135 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 RNU6-232P-201ENST00000517144 64 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 RSL24D1P11-201ENST00000591045 491 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 BNIP3P30-201ENST00000601184 574 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC090181.2-201ENST00000602975 672 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 DPRXP5-201ENST00000604662 539 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 RN7SKP299-201ENST00000606679 301 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC112200.1-201ENST00000625015 234 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 AC099654.13-201ENST00000639774 207 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SYNE4Q8N205 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYNE4Q8N205 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SYNE4Q8N205 EIF2AP4-201ENST00000424793 1781 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 AL355852.1-201ENST00000454081 1771 ntBASIC5.59□□□□□ -1.51
SYNE4Q8N205 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.59□□□□□ -1.51
SYNE4Q8N205 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
SYNE4Q8N205 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.59□□□□□ -1.52
SYNE4Q8N205 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNE4Q8N205 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNE4Q8N205 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNE4Q8N205 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNE4Q8N205 SPRR2C-201ENST00000290702 219 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNE4Q8N205 RNU6-517P-201ENST00000384362 110 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 MT-TP-201ENST00000387461 68 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 AC006366.1-201ENST00000422002 759 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNE4Q8N205 AC023512.1-201ENST00000444513 499 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 MTCYBP3-201ENST00000445588 1137 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 AP000936.2-201ENST00000447151 681 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 AC012671.1-201ENST00000451912 203 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 RN7SL542P-201ENST00000467147 294 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 AC010460.1-201ENST00000507087 466 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 AC008837.1-201ENST00000511513 412 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 RNU6-1308P-201ENST00000516817 103 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 AP001284.1-201ENST00000528393 2118 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 ZNF415P1-201ENST00000582279 1166 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 AL163642.2-201ENST00000604722 1019 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 AC010738.1-201ENST00000604970 987 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 AC016877.3-201ENST00000606778 504 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 AC099676.1-201ENST00000608886 657 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 AC019131.2-201ENST00000609071 870 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms