Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 AL390838.2-201ENST00000602394 274 ntBASIC4.84□□□□□ -1.63
ALFQ53S48 AC021749.1-201ENST00000604322 607 ntBASIC4.84□□□□□ -1.63
ALFQ53S48 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.84□□□□□ -1.63
ALFQ53S48 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.84□□□□□ -1.63
ALFQ53S48 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ALFQ53S48 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ALFQ53S48 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.84□□□□□ -1.64
ALFQ53S48 AC130650.2-201ENST00000618736 2403 ntBASIC4.84□□□□□ -1.64
ALFQ53S48 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ALFQ53S48 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ALFQ53S48 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ALFQ53S48 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
ALFQ53S48 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ALFQ53S48 AL133412.1-201ENST00000380194 2992 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ALFQ53S48 AL391684.1-202ENST00000641293 1636 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ALFQ53S48 AC106754.1-201ENST00000562632 1513 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 AC012618.3-205ENST00000637896 1496 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ALFQ53S48 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
ALFQ53S48 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ALFQ53S48 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.83□□□□□ -1.64
ALFQ53S48 MFSD8-216ENST00000641147 4009 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.83□□□□□ -1.64
ALFQ53S48 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
ALFQ53S48 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
ALFQ53S48 MIR298-201ENST00000401212 88 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 MIR1271-201ENST00000408537 86 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.83□□□□□ -1.64
ALFQ53S48 AL590139.1-201ENST00000416267 400 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 AC140479.3-201ENST00000418944 1126 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 MTND2P16-201ENST00000419987 799 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 OFD1P18Y-201ENST00000420889 959 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 GTF2IP23-201ENST00000423746 351 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 AC012519.1-201ENST00000424588 610 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 RPL21P43-201ENST00000425440 472 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 RPL31P54-201ENST00000429803 370 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.83□□□□□ -1.64
ALFQ53S48 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
ALFQ53S48 AL359265.2-201ENST00000434367 631 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.83□□□□□ -1.64
ALFQ53S48 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.83□□□□□ -1.64
ALFQ53S48 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.83□□□□□ -1.64
ALFQ53S48 AL513533.1-201ENST00000453728 415 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 AC010326.1-201ENST00000462726 602 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.83□□□□□ -1.64
ALFQ53S48 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ALFQ53S48 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.83□□□□□ -1.64
ALFQ53S48 TPT1P8-201ENST00000510120 555 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.83□□□□□ -1.64
ALFQ53S48 RN7SKP116-201ENST00000516902 319 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.83□□□□□ -1.64
ALFQ53S48 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.83□□□□□ -1.64
ALFQ53S48 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.83□□□□□ -1.64
ALFQ53S48 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
ALFQ53S48 AP006289.1-201ENST00000538089 277 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.83□□□□□ -1.64
ALFQ53S48 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.83□□□□□ -1.64
ALFQ53S48 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.83□□□□□ -1.64
ALFQ53S48 MTND3P13-201ENST00000574391 343 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 MIR4700-201ENST00000578311 74 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 RN7SL435P-201ENST00000584418 282 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.83□□□□□ -1.64
ALFQ53S48 VN1R83P-201ENST00000595685 445 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.83□□□□□ -1.64
ALFQ53S48 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.83□□□□□ -1.64
ALFQ53S48 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ALFQ53S48 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.83□□□□□ -1.64
ALFQ53S48 AL138478.1-201ENST00000612252 832 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 AL354976.1-201ENST00000613843 387 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 AL121895.2-201ENST00000619558 447 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 AC090772.4-201ENST00000623599 362 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.83□□□□□ -1.64
ALFQ53S48 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ALFQ53S48 AL022393.1-201ENST00000625142 1677 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ALFQ53S48 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.83□□□□□ -1.64
ALFQ53S48 IQCB2P-201ENST00000401788 1633 ntBASIC4.83□□□□□ -1.64
ALFQ53S48 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ALFQ53S48 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
ALFQ53S48 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ALFQ53S48 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.82□□□□□ -1.64
ALFQ53S48 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ALFQ53S48 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ALFQ53S48 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ALFQ53S48 AC079741.1-201ENST00000321498 212 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ALFQ53S48 SNORA40.2-201ENST00000390847 128 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 AL049697.2-201ENST00000403708 294 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.82□□□□□ -1.64
ALFQ53S48 RNU2-28P-201ENST00000410457 189 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 RPL37P18-201ENST00000411602 243 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 OR8G2P-201ENST00000412796 908 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.82□□□□□ -1.64
ALFQ53S48 AC106883.1-201ENST00000418805 562 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.82□□□□□ -1.64
ALFQ53S48 SKP1P3-201ENST00000429280 487 ntBASIC4.82□□□□□ -1.64
ALFQ53S48 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.82□□□□□ -1.64
ALFQ53S48 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms