Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC009643.1-201ENST00000532030 391 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC022882.1-201ENST00000532142 501 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC074050.1-201ENST00000563247 211 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC007599.1-201ENST00000568688 1174 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC022069.1-201ENST00000582910 658 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 PSMA6P4-201ENST00000603247 718 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 ELOCP34-201ENST00000604436 327 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC011626.1-201ENST00000604710 562 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AL603755.1-201ENST00000619504 163 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AL359757.1-201ENST00000623176 255 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC015871.5-202ENST00000623252 701 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC098679.5-201ENST00000624394 571 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC010608.2-201ENST00000624830 470 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC092079.1-201ENST00000558620 1985 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 ZNF542P-204ENST00000482727 1305 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 CASC19-204ENST00000641001 2055 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SLC44A4Q53GD3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
SLC44A4Q53GD3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SLC44A4Q53GD3 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.15□□□□□ -1.58
SLC44A4Q53GD3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SLC44A4Q53GD3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SLC44A4Q53GD3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
SLC44A4Q53GD3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SLC44A4Q53GD3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SLC44A4Q53GD3 AC016716.1-201ENST00000265882 708 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 OR9G4-201ENST00000302957 984 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 MIR589-201ENST00000385238 99 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AL133264.1-201ENST00000407157 562 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 RPL23AP47-201ENST00000408017 460 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AL450992.3-201ENST00000413192 568 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AC234781.2-201ENST00000426370 994 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 RPS26P40-201ENST00000435209 294 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AL354941.1-201ENST00000438600 464 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 RPL12P26-201ENST00000452430 487 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AL109741.2-201ENST00000455561 343 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AL591473.1-201ENST00000464297 313 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AK3P4-201ENST00000504283 583 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AC079395.1-201ENST00000510981 262 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 RNA5SP464-201ENST00000516251 108 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AP001880.2-201ENST00000538233 448 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AC079171.1-201ENST00000568788 914 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 VN1R84P-201ENST00000593697 235 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AC006539.2-201ENST00000601729 572 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AC068790.6-201ENST00000602558 258 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AC020910.3-201ENST00000603701 874 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AC106791.2-201ENST00000604680 391 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AP005432.2-201ENST00000608162 586 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 SCN1A-220ENST00000641603 12506 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 TRIM51GP-201ENST00000534741 1350 ntBASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A4Q53GD3 AL049737.1-201ENST00000413920 1403 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AL512646.1-201ENST00000269395 1077 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 Y_RNA.51-201ENST00000362725 102 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 Y_RNA.201-201ENST00000364052 96 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms