Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 RNA5SP315-201ENST00000516340 116 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 RNA5SP312-201ENST00000517068 116 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 MYL12AP1-201ENST00000518490 515 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.66□□□□□ -1.66
USP41Q3LFD5 AC107918.3-201ENST00000533272 382 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
USP41Q3LFD5 AC069240.1-201ENST00000548774 375 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.66□□□□□ -1.66
USP41Q3LFD5 TVP23BP1-201ENST00000557500 617 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.66□□□□□ -1.66
USP41Q3LFD5 VN1R84P-201ENST00000593697 235 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 PSMA6P4-201ENST00000603247 718 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 AC010200.2-201ENST00000605098 235 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 AL109618.2-201ENST00000605527 211 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 AC106052.1-201ENST00000608029 497 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
USP41Q3LFD5 AL158196.1-201ENST00000616786 434 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 AC091905.2-201ENST00000623143 306 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 RNA5SP196-201ENST00000625967 102 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 AC009452.1-201ENST00000640823 606 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP41Q3LFD5 KPNA2P2-201ENST00000419546 1489 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP41Q3LFD5 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
USP41Q3LFD5 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP41Q3LFD5 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP41Q3LFD5 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP41Q3LFD5 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP41Q3LFD5 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
USP41Q3LFD5 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP41Q3LFD5 LARP1BP1-201ENST00000506036 1359 ntBASIC4.65□□□□□ -1.66
USP41Q3LFD5 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
USP41Q3LFD5 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.66
USP41Q3LFD5 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
USP41Q3LFD5 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
USP41Q3LFD5 MAPK10-320ENST00000641462 6696 ntBASIC4.65□□□□□ -1.66
USP41Q3LFD5 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.65□□□□□ -1.66
USP41Q3LFD5 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
USP41Q3LFD5 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.65□□□□□ -1.66
USP41Q3LFD5 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 RNU1-63P-201ENST00000383902 164 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 RNU1-13P-201ENST00000384499 162 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 LAP3P1-201ENST00000403648 294 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 VDAC1P9-201ENST00000412766 841 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 Z74021.1-201ENST00000423610 407 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 C1DP1-201ENST00000426049 402 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 DYNLL1P7-201ENST00000429273 258 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 AL035246.1-201ENST00000433554 1255 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 USP9YP24-201ENST00000434374 697 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 AC092013.1-201ENST00000438795 332 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 USP9YP17-201ENST00000444617 696 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 HSFY6P-201ENST00000445573 403 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 TPMTP4-201ENST00000450749 678 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 RPL23AP71-201ENST00000470966 469 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 AC007537.2-201ENST00000472093 511 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 RN7SL691P-201ENST00000494487 301 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 RPS4XP18-201ENST00000495480 763 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 RNA5SP49-201ENST00000516450 115 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
USP41Q3LFD5 OR5BC1P-201ENST00000529327 739 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 AC124293.1-201ENST00000530034 493 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 OR8K4P-201ENST00000534608 872 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USP41Q3LFD5 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 AC115085.1-201ENST00000588924 229 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 AC093227.2-201ENST00000589357 285 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 SLC25A36P1-201ENST00000590111 465 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 AP001542.2-201ENST00000593141 364 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 AL450336.1-201ENST00000605180 586 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 AC008147.4-201ENST00000617570 1204 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 AC123767.1-202ENST00000620407 817 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 AC055839.1-201ENST00000634467 498 ntBASIC4.65□□□□□ -1.67
USP41Q3LFD5 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
USP41Q3LFD5 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
USP41Q3LFD5 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
USP41Q3LFD5 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USP41Q3LFD5 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
USP41Q3LFD5 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms