Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDH1Q08174 MTCO1P9-201ENST00000505577 1534 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PCDH1Q08174 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH1Q08174 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDH1Q08174 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
PCDH1Q08174 AC105074.1-201ENST00000623380 3095 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 MTND4P35-201ENST00000604257 1375 ntBASIC5.92□□□□□ -1.46
PCDH1Q08174 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
PCDH1Q08174 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.91□□□□□ -1.46
PCDH1Q08174 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
PCDH1Q08174 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH1Q08174 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDH1Q08174 AC114546.3-201ENST00000623582 1734 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH1Q08174 MSL3P1-202ENST00000440028 1468 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH1Q08174 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH1Q08174 Y_RNA.184-201ENST00000363884 108 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 RN7SKP250-201ENST00000363924 321 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 Y_RNA.315-201ENST00000365117 102 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 MIR621-201ENST00000384919 96 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 SNORA75.4-201ENST00000391278 119 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 AL136116.1-201ENST00000403591 381 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 SNORA77.2-201ENST00000408571 112 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDH1Q08174 RNU6-1148P-201ENST00000410992 104 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 VN1R36P-201ENST00000414936 291 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 RPS15AP30-201ENST00000420976 390 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDH1Q08174 SRIP2-201ENST00000428470 166 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 RPL23AP30-201ENST00000432419 501 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDH1Q08174 PPIAP13-201ENST00000434706 478 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 LINC00328-2P-201ENST00000436585 219 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 RPL23AP74-201ENST00000437246 471 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDH1Q08174 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDH1Q08174 AL645936.1-201ENST00000441979 518 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDH1Q08174 AL445466.1-201ENST00000448432 357 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 TCEA1P1-201ENST00000449716 880 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDH1Q08174 CACYBPP2-201ENST00000453625 678 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 RNU7-63P-201ENST00000459054 62 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 MRPS17P3-201ENST00000465453 385 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDH1Q08174 RPL23AP40-201ENST00000487630 390 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 RPS27P20-201ENST00000492051 246 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 EIF4EP3-201ENST00000498782 656 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDH1Q08174 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDH1Q08174 RN7SKP96-201ENST00000516948 297 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 RNU6-1220P-201ENST00000517126 108 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 AC090572.1-201ENST00000519251 160 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 TRMT10BP1-201ENST00000519377 943 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 AC107934.1-201ENST00000522215 217 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 PSMA2P1-201ENST00000526365 646 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 OR4R1P-201ENST00000529879 463 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDH1Q08174 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH1Q08174 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDH1Q08174 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDH1Q08174 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDH1Q08174 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDH1Q08174 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.91□□□□□ -1.46
PCDH1Q08174 AC093249.1-201ENST00000567049 203 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 AC007151.1-201ENST00000572774 483 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDH1Q08174 RNU4ATAC-201ENST00000580972 127 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDH1Q08174 AC006504.6-201ENST00000590142 199 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDH1Q08174 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDH1Q08174 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDH1Q08174 AC010591.1-201ENST00000603941 649 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 AC009779.8-202ENST00000607990 932 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDH1Q08174 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH1Q08174 AL354950.2-201ENST00000617939 290 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 AC022106.2-201ENST00000620114 757 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 AC134503.1-201ENST00000633048 54 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH1Q08174 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDH1Q08174 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDH1Q08174 AC092724.1-201ENST00000624623 3397 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 AC092162.3-201ENST00000624511 1624 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDH1Q08174 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH1Q08174 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDH1Q08174 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH1Q08174 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH1Q08174 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH1Q08174 CAP1P2-201ENST00000417455 1409 ntBASIC5.91□□□□□ -1.46
PCDH1Q08174 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PCDH1Q08174 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
PCDH1Q08174 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PCDH1Q08174 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PCDH1Q08174 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms