Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 HSPE1P3-201ENST00000559254 309 ntBASIC5.29□□□□□ -1.56
IRF9Q00978 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.29□□□□□ -1.56
IRF9Q00978 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.29□□□□□ -1.56
IRF9Q00978 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.29□□□□□ -1.56
IRF9Q00978 MIR4307-201ENST00000582802 84 ntBASIC5.29□□□□□ -1.56
IRF9Q00978 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.29□□□□□ -1.56
IRF9Q00978 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.29□□□□□ -1.56
IRF9Q00978 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.29□□□□□ -1.56
IRF9Q00978 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.29□□□□□ -1.56
IRF9Q00978 AC112191.3-201ENST00000604371 277 ntBASIC5.29□□□□□ -1.56
IRF9Q00978 AC010200.2-201ENST00000605098 235 ntBASIC5.29□□□□□ -1.56
IRF9Q00978 AC090517.2-201ENST00000614966 680 ntBASIC5.29□□□□□ -1.56
IRF9Q00978 AP001506.1-201ENST00000615444 211 ntBASIC5.29□□□□□ -1.56
IRF9Q00978 AC016769.4-201ENST00000616893 535 ntBASIC5.29□□□□□ -1.56
IRF9Q00978 AC132068.1-201ENST00000623805 459 ntBASIC5.29□□□□□ -1.56
IRF9Q00978 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.29□□□□□ -1.56
IRF9Q00978 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
IRF9Q00978 AC021242.1-201ENST00000507315 2035 ntBASIC5.29□□□□□ -1.56
IRF9Q00978 AP002907.1-201ENST00000606361 1430 ntBASIC5.29□□□□□ -1.56
IRF9Q00978 AC004520.1-201ENST00000608362 1413 ntBASIC5.29□□□□□ -1.56
IRF9Q00978 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.29□□□□□ -1.56
IRF9Q00978 AC019072.1-201ENST00000604535 1551 ntBASIC5.29□□□□□ -1.56
IRF9Q00978 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
IRF9Q00978 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
IRF9Q00978 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IRF9Q00978 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.28□□□□□ -1.56
IRF9Q00978 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
IRF9Q00978 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
IRF9Q00978 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IRF9Q00978 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
IRF9Q00978 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.28□□□□□ -1.56
IRF9Q00978 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.28□□□□□ -1.56
IRF9Q00978 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
IRF9Q00978 RNU1-19P-201ENST00000363306 165 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 RNA5SP435-201ENST00000364044 108 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IRF9Q00978 RNU6-809P-201ENST00000384461 107 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 MIR649-201ENST00000384843 97 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 RPL17P50-201ENST00000396131 546 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 AL133384.1-201ENST00000412744 351 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 COX5BP7-201ENST00000414780 274 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.28□□□□□ -1.56
IRF9Q00978 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.28□□□□□ -1.56
IRF9Q00978 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.28□□□□□ -1.56
IRF9Q00978 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.28□□□□□ -1.56
IRF9Q00978 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.28□□□□□ -1.56
IRF9Q00978 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IRF9Q00978 IPMKP1-201ENST00000425988 855 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 AL031736.2-201ENST00000426573 787 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.28□□□□□ -1.56
IRF9Q00978 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.28□□□□□ -1.56
IRF9Q00978 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.28□□□□□ -1.56
IRF9Q00978 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.28□□□□□ -1.56
IRF9Q00978 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.28□□□□□ -1.56
IRF9Q00978 RPL23AP16-201ENST00000441715 421 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.28□□□□□ -1.56
IRF9Q00978 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IRF9Q00978 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IRF9Q00978 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.28□□□□□ -1.56
IRF9Q00978 AC026410.2-201ENST00000460281 156 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IRF9Q00978 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.28□□□□□ -1.56
IRF9Q00978 FAM172BP-201ENST00000487497 1089 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 RN7SL814P-201ENST00000487715 300 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.28□□□□□ -1.56
IRF9Q00978 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.28□□□□□ -1.56
IRF9Q00978 TMEM251P1-201ENST00000503717 318 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.28□□□□□ -1.56
IRF9Q00978 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.28□□□□□ -1.56
IRF9Q00978 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.28□□□□□ -1.56
IRF9Q00978 AC022483.1-201ENST00000514020 567 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 SCARNA16.4-201ENST00000516956 187 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 AC100784.1-201ENST00000522790 310 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 AC022878.1-201ENST00000530684 149 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.28□□□□□ -1.56
IRF9Q00978 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.28□□□□□ -1.56
IRF9Q00978 AL049872.1-201ENST00000556323 322 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.28□□□□□ -1.56
IRF9Q00978 AL133457.1-201ENST00000564251 987 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 AC092325.1-201ENST00000566449 554 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.28□□□□□ -1.56
IRF9Q00978 MIR3913-1-201ENST00000577744 102 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 AC022884.2-201ENST00000578535 580 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 MAGOH2P-202ENST00000584384 429 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.28□□□□□ -1.56
IRF9Q00978 AF250324.2-201ENST00000608299 610 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 AC090970.3-201ENST00000612566 866 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 AC104010.1-201ENST00000616889 150 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 AC109583.2-201ENST00000617367 129 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 AC138649.3-201ENST00000622154 254 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.28□□□□□ -1.56
IRF9Q00978 AC244258.1-201ENST00000637553 1071 ntBASIC5.28□□□□□ -1.56
IRF9Q00978 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IRF9Q00978 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.28□□□□□ -1.56
IRF9Q00978 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
IRF9Q00978 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
IRF9Q00978 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IRF9Q00978 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms