Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.07□□□□□ -1.76
TPM4P67936 AC010618.1-201ENST00000469924 477 ntBASIC4.07□□□□□ -1.76
TPM4P67936 RPS4XP22-201ENST00000480755 780 ntBASIC4.07□□□□□ -1.76
TPM4P67936 AC007686.1-201ENST00000488511 463 ntBASIC4.07□□□□□ -1.76
TPM4P67936 RPS4XP15-201ENST00000489210 795 ntBASIC4.07□□□□□ -1.76
TPM4P67936 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.07□□□□□ -1.76
TPM4P67936 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.07□□□□□ -1.76
TPM4P67936 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.07□□□□□ -1.76
TPM4P67936 SNORA31.9-201ENST00000516429 84 ntBASIC4.07□□□□□ -1.76
TPM4P67936 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TPM4P67936 NDUFB9P3-201ENST00000521269 501 ntBASIC4.07□□□□□ -1.76
TPM4P67936 AC093331.1-201ENST00000521474 169 ntBASIC4.07□□□□□ -1.76
TPM4P67936 OR7E13P-201ENST00000526052 910 ntBASIC4.07□□□□□ -1.76
TPM4P67936 AC008011.1-201ENST00000545989 227 ntBASIC4.07□□□□□ -1.76
TPM4P67936 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.07□□□□□ -1.76
TPM4P67936 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.07□□□□□ -1.76
TPM4P67936 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.07□□□□□ -1.76
TPM4P67936 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.07□□□□□ -1.76
TPM4P67936 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.07□□□□□ -1.76
TPM4P67936 MIR6500-201ENST00000622700 86 ntBASIC4.07□□□□□ -1.76
TPM4P67936 AL732618.1-201ENST00000623251 301 ntBASIC4.07□□□□□ -1.76
TPM4P67936 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.07□□□□□ -1.76
TPM4P67936 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TPM4P67936 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.07□□□□□ -1.76
TPM4P67936 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
TPM4P67936 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TPM4P67936 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
TPM4P67936 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TPM4P67936 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TPM4P67936 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TPM4P67936 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TPM4P67936 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.06□□□□□ -1.76
TPM4P67936 RNA5SP42-201ENST00000364278 115 ntBASIC4.06□□□□□ -1.76
TPM4P67936 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TPM4P67936 RNU6-328P-201ENST00000390887 106 ntBASIC4.06□□□□□ -1.76
TPM4P67936 RPL21P65-201ENST00000406094 466 ntBASIC4.06□□□□□ -1.76
TPM4P67936 RNU6-55P-201ENST00000411092 107 ntBASIC4.06□□□□□ -1.76
TPM4P67936 RNU6-954P-201ENST00000411355 107 ntBASIC4.06□□□□□ -1.76
TPM4P67936 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.06□□□□□ -1.76
TPM4P67936 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.06□□□□□ -1.76
TPM4P67936 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.06□□□□□ -1.76
TPM4P67936 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.06□□□□□ -1.76
TPM4P67936 AP000873.1-201ENST00000463987 400 ntBASIC4.06□□□□□ -1.76
TPM4P67936 RPS29P22-201ENST00000472363 168 ntBASIC4.06□□□□□ -1.76
TPM4P67936 AL049830.2-201ENST00000480072 201 ntBASIC4.06□□□□□ -1.76
TPM4P67936 RPL23AP44-201ENST00000482216 473 ntBASIC4.06□□□□□ -1.76
TPM4P67936 AC012170.1-201ENST00000495139 359 ntBASIC4.06□□□□□ -1.76
TPM4P67936 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.06□□□□□ -1.76
TPM4P67936 Vault.1-201ENST00000516474 102 ntBASIC4.06□□□□□ -1.76
TPM4P67936 IGKV2-23-201ENST00000518729 323 ntBASIC4.06□□□□□ -1.76
TPM4P67936 MRPL49P2-201ENST00000521066 465 ntBASIC4.06□□□□□ -1.76
TPM4P67936 OR4C2P-201ENST00000530855 1064 ntBASIC4.06□□□□□ -1.76
TPM4P67936 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.06□□□□□ -1.76
TPM4P67936 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.06□□□□□ -1.76
TPM4P67936 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.06□□□□□ -1.76
TPM4P67936 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.06□□□□□ -1.76
TPM4P67936 AC092653.1-201ENST00000608509 531 ntBASIC4.06□□□□□ -1.76
TPM4P67936 AC099669.2-201ENST00000616549 437 ntBASIC4.06□□□□□ -1.76
TPM4P67936 AC112484.5-201ENST00000624189 228 ntBASIC4.06□□□□□ -1.76
TPM4P67936 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TPM4P67936 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TPM4P67936 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TPM4P67936 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.06□□□□□ -1.76
TPM4P67936 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TPM4P67936 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.06□□□□□ -1.76
TPM4P67936 DCAF13P3-201ENST00000561147 1334 ntBASIC4.05□□□□□ -1.76
TPM4P67936 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
TPM4P67936 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TPM4P67936 SNORA62-201ENST00000365493 153 ntBASIC4.05□□□□□ -1.76
TPM4P67936 U1.1-201ENST00000384101 164 ntBASIC4.05□□□□□ -1.76
TPM4P67936 MIR124-3-201ENST00000384866 87 ntBASIC4.05□□□□□ -1.76
TPM4P67936 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TPM4P67936 SNORA3.3-201ENST00000408712 125 ntBASIC4.05□□□□□ -1.76
TPM4P67936 OR8G2P-201ENST00000412796 908 ntBASIC4.05□□□□□ -1.76
TPM4P67936 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.05□□□□□ -1.76
TPM4P67936 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.05□□□□□ -1.76
TPM4P67936 AC245028.1-201ENST00000423259 256 ntBASIC4.05□□□□□ -1.76
TPM4P67936 AC074367.1-201ENST00000438685 1125 ntBASIC4.05□□□□□ -1.76
TPM4P67936 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.05□□□□□ -1.76
TPM4P67936 SNORD108-201ENST00000459332 71 ntBASIC4.05□□□□□ -1.76
TPM4P67936 RN7SL330P-201ENST00000469709 307 ntBASIC4.05□□□□□ -1.76
TPM4P67936 AC087312.1-201ENST00000471411 480 ntBASIC4.05□□□□□ -1.76
TPM4P67936 FCF1P3-201ENST00000496394 590 ntBASIC4.05□□□□□ -1.76
TPM4P67936 AC020893.1-201ENST00000502452 580 ntBASIC4.05□□□□□ -1.76
TPM4P67936 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.05□□□□□ -1.76
TPM4P67936 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.05□□□□□ -1.76
TPM4P67936 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.05□□□□□ -1.76
TPM4P67936 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.05□□□□□ -1.76
TPM4P67936 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TPM4P67936 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.05□□□□□ -1.76
TPM4P67936 AC025260.1-201ENST00000548858 430 ntBASIC4.05□□□□□ -1.76
TPM4P67936 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.05□□□□□ -1.76
TPM4P67936 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.05□□□□□ -1.76
TPM4P67936 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.05□□□□□ -1.76
TPM4P67936 AC023043.4-201ENST00000612081 449 ntBASIC4.05□□□□□ -1.76
TPM4P67936 AL589935.2-201ENST00000616471 1231 ntBASIC4.05□□□□□ -1.76
TPM4P67936 AC139769.3-201ENST00000618383 175 ntBASIC4.05□□□□□ -1.76
TPM4P67936 AC018816.2-201ENST00000621460 353 ntBASIC4.05□□□□□ -1.76
TPM4P67936 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
TPM4P67936 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms