Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LSM3P62310 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.04□□□□□ -1.92
LSM3P62310 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.04□□□□□ -1.92
LSM3P62310 U3.6-201ENST00000363622 211 ntBASIC3.04□□□□□ -1.92
LSM3P62310 GSTA12P-201ENST00000402398 508 ntBASIC3.04□□□□□ -1.92
LSM3P62310 SNORA3.3-201ENST00000408712 125 ntBASIC3.04□□□□□ -1.92
LSM3P62310 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM3P62310 NDUFB4P5-201ENST00000415445 361 ntBASIC3.04□□□□□ -1.92
LSM3P62310 SDCBPP3-201ENST00000419629 891 ntBASIC3.04□□□□□ -1.92
LSM3P62310 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.04□□□□□ -1.92
LSM3P62310 ETF1P3-201ENST00000430422 1160 ntBASIC3.04□□□□□ -1.92
LSM3P62310 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.04□□□□□ -1.92
LSM3P62310 HMGB3P21-201ENST00000452483 547 ntBASIC3.04□□□□□ -1.92
LSM3P62310 AL354710.1-201ENST00000453641 246 ntBASIC3.04□□□□□ -1.92
LSM3P62310 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM3P62310 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.04□□□□□ -1.92
LSM3P62310 AC091564.1-201ENST00000464563 479 ntBASIC3.04□□□□□ -1.92
LSM3P62310 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM3P62310 RN7SL323P-201ENST00000494712 295 ntBASIC3.04□□□□□ -1.92
LSM3P62310 AC093663.1-201ENST00000497190 394 ntBASIC3.04□□□□□ -1.92
LSM3P62310 POU5F1P7-201ENST00000508759 541 ntBASIC3.04□□□□□ -1.92
LSM3P62310 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.04□□□□□ -1.92
LSM3P62310 AP001207.2-201ENST00000519490 539 ntBASIC3.04□□□□□ -1.92
LSM3P62310 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM3P62310 AP003730.1-201ENST00000524605 285 ntBASIC3.04□□□□□ -1.92
LSM3P62310 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM3P62310 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM3P62310 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM3P62310 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.04□□□□□ -1.92
LSM3P62310 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.04□□□□□ -1.92
LSM3P62310 MIR6886-201ENST00000619864 61 ntBASIC3.04□□□□□ -1.92
LSM3P62310 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
LSM3P62310 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
LSM3P62310 AC032011.1-201ENST00000611703 1549 ntBASIC3.03□□□□□ -1.92
LSM3P62310 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
LSM3P62310 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LSM3P62310 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
LSM3P62310 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.03□□□□□ -1.92
LSM3P62310 RN7SKP103-201ENST00000363848 320 ntBASIC3.03□□□□□ -1.92
LSM3P62310 RNU6-398P-201ENST00000384143 109 ntBASIC3.03□□□□□ -1.92
LSM3P62310 SNORA70E-201ENST00000384492 135 ntBASIC3.03□□□□□ -1.92
LSM3P62310 RPL32P35-201ENST00000415214 394 ntBASIC3.03□□□□□ -1.92
LSM3P62310 AL139247.1-201ENST00000422768 325 ntBASIC3.03□□□□□ -1.92
LSM3P62310 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.03□□□□□ -1.92
LSM3P62310 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.03□□□□□ -1.92
LSM3P62310 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.03□□□□□ -1.92
LSM3P62310 AC115115.1-201ENST00000449927 248 ntBASIC3.03□□□□□ -1.92
LSM3P62310 CEACAMP4-201ENST00000457676 421 ntBASIC3.03□□□□□ -1.92
LSM3P62310 RPL23AP12-201ENST00000467573 473 ntBASIC3.03□□□□□ -1.92
LSM3P62310 AC023598.1-201ENST00000472521 361 ntBASIC3.03□□□□□ -1.92
LSM3P62310 AL035404.1-201ENST00000497982 568 ntBASIC3.03□□□□□ -1.92
LSM3P62310 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.03□□□□□ -1.92
LSM3P62310 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LSM3P62310 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.03□□□□□ -1.92
LSM3P62310 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.03□□□□□ -1.92
LSM3P62310 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.03□□□□□ -1.92
LSM3P62310 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.03□□□□□ -1.92
LSM3P62310 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.03□□□□□ -1.92
LSM3P62310 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.03□□□□□ -1.92
LSM3P62310 AL356218.2-201ENST00000605264 187 ntBASIC3.03□□□□□ -1.92
LSM3P62310 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.03□□□□□ -1.92
LSM3P62310 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LSM3P62310 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LSM3P62310 FP236240.3-201ENST00000623061 327 ntBASIC3.03□□□□□ -1.92
LSM3P62310 AP003355.3-201ENST00000623465 114 ntBASIC3.03□□□□□ -1.92
LSM3P62310 AC073476.4-201ENST00000628409 72 ntBASIC3.03□□□□□ -1.92
LSM3P62310 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.03□□□□□ -1.92
LSM3P62310 AC009452.1-201ENST00000640823 606 ntBASIC3.03□□□□□ -1.92
LSM3P62310 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LSM3P62310 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
LSM3P62310 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LSM3P62310 AC092326.2-201ENST00000624772 1561 ntBASIC3.03□□□□□ -1.92
LSM3P62310 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
LSM3P62310 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
LSM3P62310 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
LSM3P62310 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.02□□□□□ -1.93
LSM3P62310 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LSM3P62310 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.02□□□□□ -1.93
LSM3P62310 AC008264.2-201ENST00000610193 3731 ntBASIC3.02□□□□□ -1.93
LSM3P62310 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
LSM3P62310 RNVU1-6-201ENST00000364688 164 ntBASIC3.02□□□□□ -1.93
LSM3P62310 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LSM3P62310 PTMAP5-201ENST00000393073 333 ntBASIC3.02□□□□□ -1.93
LSM3P62310 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM3P62310 DBIP2-201ENST00000419076 262 ntBASIC3.02□□□□□ -1.93
LSM3P62310 RPS27AP7-201ENST00000422792 455 ntBASIC3.02□□□□□ -1.93
LSM3P62310 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM3P62310 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.02□□□□□ -1.93
LSM3P62310 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM3P62310 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM3P62310 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM3P62310 METTL15P1-201ENST00000481421 1045 ntBASIC3.02□□□□□ -1.93
LSM3P62310 NDUFA5P12-201ENST00000503796 343 ntBASIC3.02□□□□□ -1.93
LSM3P62310 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.02□□□□□ -1.93
LSM3P62310 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC3.02□□□□□ -1.93
LSM3P62310 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.02□□□□□ -1.93
LSM3P62310 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM3P62310 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM3P62310 AC005255.1-201ENST00000593748 216 ntBASIC3.02□□□□□ -1.93
LSM3P62310 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms