Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC2.75□□□□□ -1.97
CKS1BP61024 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.75□□□□□ -1.97
CKS1BP61024 AC125238.1-201ENST00000448842 249 ntBASIC2.75□□□□□ -1.97
CKS1BP61024 RPL7P52-201ENST00000449200 742 ntBASIC2.75□□□□□ -1.97
CKS1BP61024 RPL7P61-201ENST00000451721 751 ntBASIC2.75□□□□□ -1.97
CKS1BP61024 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC2.75□□□□□ -1.97
CKS1BP61024 RN7SL442P-201ENST00000473804 320 ntBASIC2.75□□□□□ -1.97
CKS1BP61024 AC004069.2-201ENST00000505438 1114 ntBASIC2.75□□□□□ -1.97
CKS1BP61024 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC2.75□□□□□ -1.97
CKS1BP61024 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.75□□□□□ -1.97
CKS1BP61024 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.75□□□□□ -1.97
CKS1BP61024 AP000619.3-201ENST00000535634 1127 ntBASIC2.75□□□□□ -1.97
CKS1BP61024 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC2.75□□□□□ -1.97
CKS1BP61024 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC2.75□□□□□ -1.97
CKS1BP61024 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC2.75□□□□□ -1.97
CKS1BP61024 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.75□□□□□ -1.97
CKS1BP61024 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC2.75□□□□□ -1.97
CKS1BP61024 AC133644.2-201ENST00000608142 540 ntBASIC2.75□□□□□ -1.97
CKS1BP61024 AL391834.1-201ENST00000609609 560 ntBASIC2.75□□□□□ -1.97
CKS1BP61024 MIR6886-201ENST00000619864 61 ntBASIC2.75□□□□□ -1.97
CKS1BP61024 AL139089.1-201ENST00000620372 975 ntBASIC2.75□□□□□ -1.97
CKS1BP61024 AC095038.2-201ENST00000621464 1070 ntBASIC2.75□□□□□ -1.97
CKS1BP61024 CR392039.4-201ENST00000624968 501 ntBASIC2.75□□□□□ -1.97
CKS1BP61024 AC008013.2-202ENST00000637965 364 ntBASIC2.75□□□□□ -1.97
CKS1BP61024 IPO8P1-201ENST00000455509 3109 ntBASIC2.75□□□□□ -1.97
CKS1BP61024 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CKS1BP61024 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
CKS1BP61024 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CKS1BP61024 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CKS1BP61024 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CKS1BP61024 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.74□□□□□ -1.97
CKS1BP61024 SNORA60-201ENST00000362396 134 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 RNU1-14P-201ENST00000362759 152 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 SNORA73.2-201ENST00000364946 201 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 AC240504.1-201ENST00000395709 845 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 AL035419.1-201ENST00000397037 564 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 AL109941.1-201ENST00000401925 229 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 RNU4-25P-201ENST00000410569 230 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC2.74□□□□□ -1.97
CKS1BP61024 SDCBPP3-201ENST00000419629 891 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 OR5BE1P-201ENST00000425977 939 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC2.74□□□□□ -1.97
CKS1BP61024 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC2.74□□□□□ -1.97
CKS1BP61024 NF1P3-201ENST00000457709 450 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 AC068724.1-201ENST00000487100 792 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 AF213884.1-201ENST00000488102 463 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CKS1BP61024 AC026726.1-201ENST00000512859 601 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 AC093755.1-201ENST00000512950 1023 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 SNORA31.26-201ENST00000517250 137 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 LECT2-205ENST00000522943 574 ntTSL 3 BASIC2.74□□□□□ -1.97
CKS1BP61024 AF279873.1-201ENST00000523393 313 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.74□□□□□ -1.97
CKS1BP61024 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CKS1BP61024 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.74□□□□□ -1.97
CKS1BP61024 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.74□□□□□ -1.97
CKS1BP61024 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC2.74□□□□□ -1.97
CKS1BP61024 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.74□□□□□ -1.97
CKS1BP61024 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.74□□□□□ -1.97
CKS1BP61024 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC2.74□□□□□ -1.97
CKS1BP61024 YWHAQP7-201ENST00000603536 658 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 AL161616.1-201ENST00000611867 286 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 FAM27D1-201ENST00000612308 341 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 MIR7155-201ENST00000615925 56 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 MIR6729-201ENST00000618194 65 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 AC092159.4-201ENST00000624944 550 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 AC112200.1-201ENST00000625015 234 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 OR5BE1P-202ENST00000641168 1176 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CKS1BP61024 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CKS1BP61024 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.74□□□□□ -1.97
CKS1BP61024 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.74□□□□□ -1.97
CKS1BP61024 DHX40P1-201ENST00000588725 1412 ntBASIC2.74□□□□□ -1.97
CKS1BP61024 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.74□□□□□ -1.97
CKS1BP61024 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.73□□□□□ -1.97
CKS1BP61024 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC2.73□□□□□ -1.97
CKS1BP61024 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CKS1BP61024 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.73□□□□□ -1.97
CKS1BP61024 AC092435.3-201ENST00000565538 3654 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CKS1BP61024 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CKS1BP61024 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CKS1BP61024 RNU6-532P-201ENST00000384318 107 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 MIR105-2-201ENST00000385083 81 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 RNA5SP293-201ENST00000410527 113 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 RN7SKP235-201ENST00000410662 305 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CKS1BP61024 MFSD13B-201ENST00000420133 1290 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 AC006065.1-201ENST00000422539 802 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 VDAC1P6-201ENST00000430062 855 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC2.73□□□□□ -1.97
CKS1BP61024 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC2.73□□□□□ -1.97
CKS1BP61024 AC105402.2-201ENST00000438503 358 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 AC006466.1-201ENST00000438721 289 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 AC092809.1-201ENST00000441469 474 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 AL500522.2-201ENST00000448562 343 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.73□□□□□ -1.97
CKS1BP61024 RN7SL98P-201ENST00000462271 300 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 RPL7P1-201ENST00000468161 747 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 RPL7P9-201ENST00000468715 747 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms