Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDL3P58872 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDL3P58872 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDL3P58872 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDL3P58872 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RHBDL3P58872 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDL3P58872 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDL3P58872 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDL3P58872 AC017079.1-201ENST00000333650 415 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDL3P58872 RNU6-1279P-201ENST00000383917 103 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 MIR649-201ENST00000384843 97 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 RNU6-1300P-201ENST00000391046 108 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.41□□□□□ -1.54
RHBDL3P58872 AC009237.2-201ENST00000421358 284 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 HIGD1AP12-201ENST00000427832 281 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 USP9YP24-201ENST00000434374 697 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.41□□□□□ -1.54
RHBDL3P58872 USP9YP17-201ENST00000444617 696 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 TDGF1P1-201ENST00000445734 527 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.41□□□□□ -1.54
RHBDL3P58872 AC053481.1-201ENST00000467217 306 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RHBDL3P58872 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.41□□□□□ -1.54
RHBDL3P58872 GTF2IP9-201ENST00000502460 301 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 AC015795.1-201ENST00000513669 327 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.41□□□□□ -1.54
RHBDL3P58872 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.41□□□□□ -1.54
RHBDL3P58872 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.41□□□□□ -1.54
RHBDL3P58872 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.41□□□□□ -1.54
RHBDL3P58872 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.41□□□□□ -1.54
RHBDL3P58872 MIR3939-201ENST00000582614 106 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.41□□□□□ -1.54
RHBDL3P58872 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.41□□□□□ -1.54
RHBDL3P58872 AL390838.2-201ENST00000602394 274 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 AL365400.2-201ENST00000605604 902 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 AC114781.5-201ENST00000615297 108 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.41□□□□□ -1.54
RHBDL3P58872 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.41□□□□□ -1.54
RHBDL3P58872 AL133243.3-201ENST00000617415 3004 ntBASIC5.41□□□□□ -1.54
RHBDL3P58872 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDL3P58872 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RHBDL3P58872 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RHBDL3P58872 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RHBDL3P58872 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
RHBDL3P58872 RNU6-921P-201ENST00000384361 107 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 SNORD116-12-201ENST00000384468 92 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 OR6C69P-201ENST00000394268 893 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 OR4K6P-201ENST00000416478 897 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 RAD23BP1-201ENST00000421404 1227 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 RPS12P5-201ENST00000423449 371 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 OR51AB1P-201ENST00000429046 620 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.4□□□□□ -1.54
RHBDL3P58872 MRPL48P1-201ENST00000445390 636 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 AC009963.2-201ENST00000453431 138 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.4□□□□□ -1.54
RHBDL3P58872 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.4□□□□□ -1.54
RHBDL3P58872 RN7SL303P-201ENST00000469773 251 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 S100A11P1-201ENST00000477525 312 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 GAPDHP36-201ENST00000480688 918 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 RN7SL810P-201ENST00000493031 276 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 PRELID3BP7-201ENST00000503606 469 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RHBDL3P58872 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.4□□□□□ -1.54
RHBDL3P58872 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.4□□□□□ -1.54
RHBDL3P58872 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.4□□□□□ -1.54
RHBDL3P58872 AP001189.2-201ENST00000527320 189 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 DEFB109D-201ENST00000529497 240 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RHBDL3P58872 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
RHBDL3P58872 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.4□□□□□ -1.54
RHBDL3P58872 AGGF1P8-201ENST00000562979 1000 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 AL160237.3-201ENST00000604114 1013 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 RNA5SP108-201ENST00000605921 117 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 AC020634.1-201ENST00000608701 549 ntBASIC5.4□□□□□ -1.54
RHBDL3P58872 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
RHBDL3P58872 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RHBDL3P58872 AC018529.3-201ENST00000624212 2254 ntBASIC5.4□□□□□ -1.55
RHBDL3P58872 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.4□□□□□ -1.55
RHBDL3P58872 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
RHBDL3P58872 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.39□□□□□ -1.55
RHBDL3P58872 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
RHBDL3P58872 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
RHBDL3P58872 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDL3P58872 LINC00622-201ENST00000562811 1570 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RHBDL3P58872 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RHBDL3P58872 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.39□□□□□ -1.55
RHBDL3P58872 RNU6-492P-201ENST00000363035 104 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 U3.15-201ENST00000365398 212 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RHBDL3P58872 MIR124-3-201ENST00000384866 87 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.39□□□□□ -1.55
RHBDL3P58872 FCF1P2-201ENST00000415284 583 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 CYCSP10-201ENST00000417973 294 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 RPS12P23-201ENST00000419579 400 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDL3P58872 AC114973.1-201ENST00000429057 632 ntBASIC5.39□□□□□ -1.55
RHBDL3P58872 VDAC1P6-201ENST00000430062 855 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms