Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN18P56856 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN18P56856 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN18P56856 HLA-N-201ENST00000437516 135 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN18P56856 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN18P56856 MTCYBP21-201ENST00000443300 1113 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN18P56856 AC068305.1-201ENST00000497406 726 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 AC025459.1-201ENST00000504072 156 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN18P56856 SNX5P1-201ENST00000505757 1041 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 AC005351.1-201ENST00000511152 786 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 AC006499.6-201ENST00000511169 607 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN18P56856 RNU6-760P-201ENST00000516078 97 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN18P56856 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN18P56856 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.61□□□□□ -1.83
CLDN18P56856 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN18P56856 AC007599.1-201ENST00000568688 1174 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 AC079171.1-201ENST00000568788 914 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 AL606490.9-201ENST00000603331 271 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 AC113194.1-201ENST00000606037 500 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 AL359715.5-201ENST00000623431 443 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN18P56856 CDRT1-208ENST00000630868 794 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 ATE1-AS1-202ENST00000636460 506 ntBASIC3.61□□□□□ -1.83
CLDN18P56856 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN18P56856 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN18P56856 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.61□□□□□ -1.83
CLDN18P56856 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN18P56856 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CLDN18P56856 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN18P56856 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CLDN18P56856 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CLDN18P56856 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CLDN18P56856 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN18P56856 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN18P56856 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN18P56856 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN18P56856 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CLDN18P56856 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CLDN18P56856 AL138878.1-201ENST00000405131 347 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN18P56856 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN18P56856 KCTD10P1-201ENST00000434203 625 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN18P56856 RPL23AP71-201ENST00000470966 469 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN18P56856 MTCO1P31-201ENST00000506355 492 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 AC090071.1-201ENST00000507713 644 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 PTGES3P3-201ENST00000511479 482 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 RN7SKP141-201ENST00000516167 338 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 RNU6-551P-201ENST00000516661 103 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 RNA5SP309-201ENST00000516670 106 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN18P56856 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN18P56856 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.6□□□□□ -1.83
CLDN18P56856 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN18P56856 AC091516.1-201ENST00000549191 703 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 AC107016.1-201ENST00000550463 337 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN18P56856 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN18P56856 AC120057.2-201ENST00000571520 271 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 AC093227.2-201ENST00000589357 285 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
CLDN18P56856 AL109618.2-201ENST00000605527 211 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.6□□□□□ -1.83
CLDN18P56856 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN18P56856 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN18P56856 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN18P56856 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN18P56856 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN18P56856 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN18P56856 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN18P56856 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN18P56856 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN18P56856 AL049737.1-201ENST00000413920 1403 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN18P56856 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN18P56856 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN18P56856 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CLDN18P56856 AC027287.1-201ENST00000553115 1453 ntBASIC3.6□□□□□ -1.83
CLDN18P56856 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CLDN18P56856 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CLDN18P56856 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CLDN18P56856 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN18P56856 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN18P56856 RNU1-64P-201ENST00000365443 163 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN18P56856 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN18P56856 RNU6-356P-201ENST00000384140 107 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CLDN18P56856 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN18P56856 AL589655.1-201ENST00000405398 482 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms