Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.97□□□□□ -1.61
COPB1P53618 RNU7-125P-201ENST00000458760 62 ntBASIC4.97□□□□□ -1.61
COPB1P53618 AC063943.1-201ENST00000465434 453 ntBASIC4.97□□□□□ -1.61
COPB1P53618 AC108734.3-201ENST00000481241 1165 ntBASIC4.97□□□□□ -1.61
COPB1P53618 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.97□□□□□ -1.61
COPB1P53618 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.97□□□□□ -1.61
COPB1P53618 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.97□□□□□ -1.61
COPB1P53618 OR5H4P-201ENST00000510851 923 ntBASIC4.97□□□□□ -1.61
COPB1P53618 AC117532.1-201ENST00000514638 323 ntBASIC4.97□□□□□ -1.61
COPB1P53618 RN7SKP276-201ENST00000516242 268 ntBASIC4.97□□□□□ -1.61
COPB1P53618 AC008694.2-201ENST00000517591 306 ntBASIC4.97□□□□□ -1.61
COPB1P53618 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.97□□□□□ -1.61
COPB1P53618 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.97□□□□□ -1.61
COPB1P53618 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.97□□□□□ -1.61
COPB1P53618 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COPB1P53618 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.97□□□□□ -1.61
COPB1P53618 AC092747.2-201ENST00000545069 983 ntBASIC4.97□□□□□ -1.61
COPB1P53618 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.97□□□□□ -1.61
COPB1P53618 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.97□□□□□ -1.61
COPB1P53618 AC124312.4-201ENST00000605533 310 ntBASIC4.97□□□□□ -1.61
COPB1P53618 AC099676.1-201ENST00000608886 657 ntBASIC4.97□□□□□ -1.61
COPB1P53618 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COPB1P53618 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.97□□□□□ -1.61
COPB1P53618 AC079248.2-201ENST00000623779 326 ntBASIC4.97□□□□□ -1.61
COPB1P53618 AC098679.4-201ENST00000624241 654 ntBASIC4.97□□□□□ -1.61
COPB1P53618 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.97□□□□□ -1.61
COPB1P53618 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.97□□□□□ -1.61
COPB1P53618 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.97□□□□□ -1.61
COPB1P53618 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.97□□□□□ -1.61
COPB1P53618 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COPB1P53618 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.61
COPB1P53618 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.96□□□□□ -1.61
COPB1P53618 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPB1P53618 SGO1P2-201ENST00000429458 1589 ntBASIC4.96□□□□□ -1.62
COPB1P53618 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
COPB1P53618 AC100871.1-201ENST00000507871 1456 ntBASIC4.96□□□□□ -1.62
COPB1P53618 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPB1P53618 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.96□□□□□ -1.62
COPB1P53618 AC139769.1-204ENST00000472297 1931 ntBASIC4.96□□□□□ -1.62
COPB1P53618 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPB1P53618 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
COPB1P53618 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.96□□□□□ -1.62
COPB1P53618 RNU6-1339P-201ENST00000363574 91 ntBASIC4.96□□□□□ -1.62
COPB1P53618 RNU6-560P-201ENST00000364007 108 ntBASIC4.96□□□□□ -1.62
COPB1P53618 MIR137-201ENST00000385223 102 ntBASIC4.96□□□□□ -1.62
COPB1P53618 RNU6-1320P-201ENST00000390838 107 ntBASIC4.96□□□□□ -1.62
COPB1P53618 RNU6-1269P-201ENST00000391139 107 ntBASIC4.96□□□□□ -1.62
COPB1P53618 AC104297.1-201ENST00000393779 870 ntBASIC4.96□□□□□ -1.62
COPB1P53618 RPS4XP9-201ENST00000405151 780 ntBASIC4.96□□□□□ -1.62
COPB1P53618 RN7SKP100-201ENST00000411258 284 ntBASIC4.96□□□□□ -1.62
COPB1P53618 AC016397.1-201ENST00000412463 242 ntBASIC4.96□□□□□ -1.62
COPB1P53618 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.96□□□□□ -1.62
COPB1P53618 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COPB1P53618 AC006960.1-201ENST00000419980 153 ntBASIC4.96□□□□□ -1.62
COPB1P53618 SKP1P3-201ENST00000429280 487 ntBASIC4.96□□□□□ -1.62
COPB1P53618 MTND1P20-201ENST00000430341 950 ntBASIC4.96□□□□□ -1.62
COPB1P53618 RPL23AP25-201ENST00000430973 463 ntBASIC4.96□□□□□ -1.62
COPB1P53618 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.96□□□□□ -1.62
COPB1P53618 YWHAZP7-201ENST00000436906 631 ntBASIC4.96□□□□□ -1.62
COPB1P53618 ISCA1P2-201ENST00000438679 421 ntBASIC4.96□□□□□ -1.62
COPB1P53618 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.96□□□□□ -1.62
COPB1P53618 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.96□□□□□ -1.62
COPB1P53618 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.96□□□□□ -1.62
COPB1P53618 DNAJC19P8-201ENST00000452887 259 ntBASIC4.96□□□□□ -1.62
COPB1P53618 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.96□□□□□ -1.62
COPB1P53618 RNU6-599P-201ENST00000459383 107 ntBASIC4.96□□□□□ -1.62
COPB1P53618 RNU6-1193P-201ENST00000459461 107 ntBASIC4.96□□□□□ -1.62
COPB1P53618 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.96□□□□□ -1.62
COPB1P53618 RPL7P16-201ENST00000479738 738 ntBASIC4.96□□□□□ -1.62
COPB1P53618 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COPB1P53618 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.96□□□□□ -1.62
COPB1P53618 AC104090.1-201ENST00000506341 1171 ntBASIC4.96□□□□□ -1.62
COPB1P53618 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.96□□□□□ -1.62
COPB1P53618 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.96□□□□□ -1.62
COPB1P53618 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.96□□□□□ -1.62
COPB1P53618 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.96□□□□□ -1.62
COPB1P53618 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.96□□□□□ -1.62
COPB1P53618 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.96□□□□□ -1.62
COPB1P53618 AC084824.1-201ENST00000550917 1005 ntBASIC4.96□□□□□ -1.62
COPB1P53618 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.96□□□□□ -1.62
COPB1P53618 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.96□□□□□ -1.62
COPB1P53618 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.96□□□□□ -1.62
COPB1P53618 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.96□□□□□ -1.62
COPB1P53618 AC106791.2-201ENST00000604680 391 ntBASIC4.96□□□□□ -1.62
COPB1P53618 AP005137.2-201ENST00000609238 400 ntBASIC4.96□□□□□ -1.62
COPB1P53618 RNU6-368P-201ENST00000620928 107 ntBASIC4.96□□□□□ -1.62
COPB1P53618 RNU6-538P-201ENST00000622329 107 ntBASIC4.96□□□□□ -1.62
COPB1P53618 AC091953.3-201ENST00000623220 236 ntBASIC4.96□□□□□ -1.62
COPB1P53618 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.96□□□□□ -1.62
COPB1P53618 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
COPB1P53618 AL137100.1-201ENST00000556703 1620 ntBASIC4.96□□□□□ -1.62
COPB1P53618 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPB1P53618 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COPB1P53618 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COPB1P53618 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.95□□□□□ -1.62
COPB1P53618 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COPB1P53618 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
COPB1P53618 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.95□□□□□ -1.62
COPB1P53618 ELL2P3-201ENST00000457883 1602 ntBASIC4.95□□□□□ -1.62
COPB1P53618 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms