Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 BTF3L4P4-201ENST00000506381 449 ntBASIC3.98□□□□□ -1.77
TNFSF9P41273 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.98□□□□□ -1.77
TNFSF9P41273 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.98□□□□□ -1.77
TNFSF9P41273 SNORA70.18-201ENST00000516696 98 ntBASIC3.98□□□□□ -1.77
TNFSF9P41273 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.98□□□□□ -1.77
TNFSF9P41273 HIGD1AP18-201ENST00000520730 278 ntBASIC3.98□□□□□ -1.77
TNFSF9P41273 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.98□□□□□ -1.77
TNFSF9P41273 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.98□□□□□ -1.77
TNFSF9P41273 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.98□□□□□ -1.77
TNFSF9P41273 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.98□□□□□ -1.77
TNFSF9P41273 EIF1P6-201ENST00000600054 334 ntBASIC3.98□□□□□ -1.77
TNFSF9P41273 AL133247.2-201ENST00000603236 482 ntBASIC3.98□□□□□ -1.77
TNFSF9P41273 AL163642.2-201ENST00000604722 1019 ntBASIC3.98□□□□□ -1.77
TNFSF9P41273 SNORA51-201ENST00000606420 132 ntBASIC3.98□□□□□ -1.77
TNFSF9P41273 AC069200.1-201ENST00000609511 323 ntBASIC3.98□□□□□ -1.77
TNFSF9P41273 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.98□□□□□ -1.77
TNFSF9P41273 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
TNFSF9P41273 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
TNFSF9P41273 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.98□□□□□ -1.77
TNFSF9P41273 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TNFSF9P41273 PHKBP1-201ENST00000450951 1951 ntBASIC3.98□□□□□ -1.77
TNFSF9P41273 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TNFSF9P41273 SPATA2P1-201ENST00000431223 2055 ntBASIC3.98□□□□□ -1.77
TNFSF9P41273 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TNFSF9P41273 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TNFSF9P41273 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFSF9P41273 AC106871.1-201ENST00000568324 3102 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TNFSF9P41273 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
TNFSF9P41273 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TNFSF9P41273 SNORD46.1-201ENST00000364139 104 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 AL121834.1-202ENST00000404494 277 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 HSPE1P8-201ENST00000406997 288 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 RPS3AP25-201ENST00000411660 793 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.97□□□□□ -1.77
TNFSF9P41273 ATP5A1P2-201ENST00000412323 255 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 CRYBB2P1-203ENST00000415709 538 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFSF9P41273 AL691447.1-201ENST00000419456 387 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 SEC63P1-201ENST00000425785 1258 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 YWHAEP5-201ENST00000431545 765 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 RPS3AP46-201ENST00000448352 682 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 IFNWP4-201ENST00000453148 294 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 AC005229.2-201ENST00000456995 399 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 RNU7-27P-201ENST00000459281 62 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFSF9P41273 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFSF9P41273 AC021146.7-201ENST00000509604 775 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 AC026403.1-201ENST00000518938 295 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.97□□□□□ -1.77
TNFSF9P41273 AC022882.1-201ENST00000532142 501 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TNFSF9P41273 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.97□□□□□ -1.77
TNFSF9P41273 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFSF9P41273 EIF1AXP2-201ENST00000555940 413 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 TRAV15-201ENST00000556680 249 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.97□□□□□ -1.77
TNFSF9P41273 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFSF9P41273 MIR3922-201ENST00000585192 84 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TNFSF9P41273 AC017076.1-201ENST00000607613 578 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.97□□□□□ -1.77
TNFSF9P41273 AC016957.2-201ENST00000616998 848 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 AL391597.1-201ENST00000618707 694 ntBASIC3.97□□□□□ -1.77
TNFSF9P41273 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
TNFSF9P41273 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
TNFSF9P41273 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TNFSF9P41273 MAPK10-372ENST00000641954 3413 ntBASIC3.96□□□□□ -1.77
TNFSF9P41273 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
TNFSF9P41273 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
TNFSF9P41273 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.96□□□□□ -1.78
TNFSF9P41273 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TNFSF9P41273 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TNFSF9P41273 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TNFSF9P41273 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TNFSF9P41273 AC007685.1-201ENST00000329806 452 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 SNORD9-201ENST00000362566 104 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 RNU4-23P-201ENST00000362839 140 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 RNU6-666P-201ENST00000363499 107 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TNFSF9P41273 ATP5F1P4-201ENST00000397288 746 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 RPS24P12-201ENST00000402084 394 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 SNORA11.1-201ENST00000408133 129 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 RNU6-564P-201ENST00000410983 104 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 DBIP2-201ENST00000419076 262 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TNFSF9P41273 USP12PY-201ENST00000427677 1064 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.96□□□□□ -1.78
TNFSF9P41273 AL050321.1-201ENST00000432363 400 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFSF9P41273 RPL6P5-201ENST00000445678 828 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 MTND2P25-201ENST00000449028 610 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 RPS6P2-201ENST00000454208 705 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFSF9P41273 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.96□□□□□ -1.78
TNFSF9P41273 RPL7P49-201ENST00000471402 708 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.96□□□□□ -1.78
TNFSF9P41273 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFSF9P41273 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFSF9P41273 RN7SKP209-201ENST00000516888 304 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms