Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RFC3P40938 AC006042.3-201ENST00000454684 1469 ntBASIC3.67□□□□□ -1.82
RFC3P40938 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
RFC3P40938 AL353743.4-201ENST00000422653 1547 ntBASIC3.67□□□□□ -1.82
RFC3P40938 SNORA60-201ENST00000362396 134 ntBASIC3.67□□□□□ -1.82
RFC3P40938 SNORA62.2-201ENST00000364672 152 ntBASIC3.67□□□□□ -1.82
RFC3P40938 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RFC3P40938 ATP5F1P3-201ENST00000397213 657 ntBASIC3.67□□□□□ -1.82
RFC3P40938 RN7SKP177-201ENST00000410567 355 ntBASIC3.67□□□□□ -1.82
RFC3P40938 PGBD4P8-201ENST00000412993 562 ntBASIC3.67□□□□□ -1.82
RFC3P40938 AC105402.1-201ENST00000413336 545 ntBASIC3.67□□□□□ -1.82
RFC3P40938 ARL4AP4-201ENST00000434170 518 ntBASIC3.67□□□□□ -1.82
RFC3P40938 MTND2P8-201ENST00000450555 1025 ntBASIC3.67□□□□□ -1.82
RFC3P40938 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.67□□□□□ -1.82
RFC3P40938 TPMTP4-201ENST00000450749 678 ntBASIC3.67□□□□□ -1.82
RFC3P40938 RPL36AP13-201ENST00000457490 317 ntBASIC3.67□□□□□ -1.82
RFC3P40938 RPL21P129-201ENST00000491732 478 ntBASIC3.67□□□□□ -1.82
RFC3P40938 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.67□□□□□ -1.82
RFC3P40938 SUMO1P1-201ENST00000497904 306 ntBASIC3.67□□□□□ -1.82
RFC3P40938 HMGB1P3-201ENST00000502802 616 ntBASIC3.67□□□□□ -1.82
RFC3P40938 RNU7-143P-201ENST00000516781 65 ntBASIC3.67□□□□□ -1.82
RFC3P40938 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.67□□□□□ -1.82
RFC3P40938 AL161713.1-201ENST00000555538 145 ntBASIC3.67□□□□□ -1.82
RFC3P40938 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.67□□□□□ -1.82
RFC3P40938 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.67□□□□□ -1.82
RFC3P40938 MIR5685-201ENST00000579080 79 ntBASIC3.67□□□□□ -1.82
RFC3P40938 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.67□□□□□ -1.82
RFC3P40938 NF1P5-201ENST00000588287 448 ntBASIC3.67□□□□□ -1.82
RFC3P40938 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.67□□□□□ -1.82
RFC3P40938 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.67□□□□□ -1.82
RFC3P40938 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RFC3P40938 AC106871.1-201ENST00000568324 3102 ntBASIC3.67□□□□□ -1.82
RFC3P40938 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
RFC3P40938 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.67□□□□□ -1.82
RFC3P40938 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RFC3P40938 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RFC3P40938 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RFC3P40938 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
RFC3P40938 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.67□□□□□ -1.82
RFC3P40938 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.66□□□□□ -1.82
RFC3P40938 AC090229.1-201ENST00000590983 1609 ntBASIC3.66□□□□□ -1.82
RFC3P40938 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RFC3P40938 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFC3P40938 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RFC3P40938 RNU1-87P-201ENST00000363727 170 ntBASIC3.66□□□□□ -1.82
RFC3P40938 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFC3P40938 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RFC3P40938 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.66□□□□□ -1.82
RFC3P40938 RNU4-31P-201ENST00000384211 141 ntBASIC3.66□□□□□ -1.82
RFC3P40938 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.66□□□□□ -1.82
RFC3P40938 RN7SKP159-201ENST00000410657 292 ntBASIC3.66□□□□□ -1.82
RFC3P40938 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.66□□□□□ -1.82
RFC3P40938 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFC3P40938 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.66□□□□□ -1.82
RFC3P40938 AL445528.1-201ENST00000426330 420 ntBASIC3.66□□□□□ -1.82
RFC3P40938 HMGB3P5-201ENST00000428894 612 ntBASIC3.66□□□□□ -1.82
RFC3P40938 MED6P1-201ENST00000439659 713 ntBASIC3.66□□□□□ -1.82
RFC3P40938 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.66□□□□□ -1.82
RFC3P40938 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.66□□□□□ -1.82
RFC3P40938 PPIAP15-201ENST00000479662 484 ntBASIC3.66□□□□□ -1.82
RFC3P40938 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RFC3P40938 RNU6-551P-201ENST00000516661 103 ntBASIC3.66□□□□□ -1.82
RFC3P40938 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.66□□□□□ -1.82
RFC3P40938 AC107982.3-201ENST00000584957 985 ntBASIC3.66□□□□□ -1.82
RFC3P40938 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RFC3P40938 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.66□□□□□ -1.82
RFC3P40938 AC005255.1-201ENST00000593748 216 ntBASIC3.66□□□□□ -1.82
RFC3P40938 AC015726.1-201ENST00000602353 681 ntBASIC3.66□□□□□ -1.82
RFC3P40938 AC010680.3-201ENST00000604215 520 ntBASIC3.66□□□□□ -1.82
RFC3P40938 AC245389.1-201ENST00000605141 529 ntBASIC3.66□□□□□ -1.82
RFC3P40938 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RFC3P40938 AC006133.1-201ENST00000617106 264 ntBASIC3.66□□□□□ -1.82
RFC3P40938 AC138907.10-201ENST00000623708 983 ntBASIC3.66□□□□□ -1.82
RFC3P40938 AC034229.5-201ENST00000624258 185 ntBASIC3.66□□□□□ -1.82
RFC3P40938 CR392039.4-201ENST00000624968 501 ntBASIC3.66□□□□□ -1.82
RFC3P40938 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.66□□□□□ -1.82
RFC3P40938 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
RFC3P40938 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFC3P40938 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFC3P40938 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RFC3P40938 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.66□□□□□ -1.82
RFC3P40938 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFC3P40938 RPS4XP5-202ENST00000449995 1334 ntBASIC3.66□□□□□ -1.82
RFC3P40938 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.66□□□□□ -1.82
RFC3P40938 SAGE2P-201ENST00000420011 2126 ntBASIC3.65□□□□□ -1.82
RFC3P40938 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RFC3P40938 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RFC3P40938 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RFC3P40938 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
RFC3P40938 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFC3P40938 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RFC3P40938 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
RFC3P40938 MIR670-201ENST00000390142 98 ntBASIC3.65□□□□□ -1.83
RFC3P40938 AL590704.1-201ENST00000402856 794 ntBASIC3.65□□□□□ -1.83
RFC3P40938 AC244453.4-201ENST00000419150 388 ntBASIC3.65□□□□□ -1.83
RFC3P40938 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.65□□□□□ -1.83
RFC3P40938 MRPS33P4-201ENST00000434892 317 ntBASIC3.65□□□□□ -1.83
RFC3P40938 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.65□□□□□ -1.83
RFC3P40938 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.65□□□□□ -1.83
RFC3P40938 RPL34P26-201ENST00000445636 354 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms