Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXD13P35453 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXD13P35453 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXD13P35453 AC073387.2-201ENST00000604797 784 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXD13P35453 SNX18P1Y-201ENST00000616231 511 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 RNU6-156P-201ENST00000621869 107 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 AP003485.1-201ENST00000625093 753 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXD13P35453 AL445984.1-201ENST00000637834 659 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD13P35453 MTND5P28-201ENST00000438005 1594 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD13P35453 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXD13P35453 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
HOXD13P35453 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD13P35453 AC018529.3-201ENST00000624212 2254 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HOXD13P35453 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXD13P35453 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD13P35453 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXD13P35453 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXD13P35453 GSTA8P-201ENST00000404253 637 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXD13P35453 RNU4-25P-201ENST00000410569 230 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 AC004987.3-201ENST00000413879 771 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 BTF3P8-201ENST00000414577 526 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 AL807761.1-201ENST00000417622 171 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 RPS15AP40-201ENST00000419621 391 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 RPL18P10-201ENST00000425606 538 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 AC092634.2-201ENST00000428146 1010 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 ELOCP6-201ENST00000429066 328 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 UBE2V1P1-201ENST00000430836 445 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXD13P35453 PTGES3P1-201ENST00000439531 483 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXD13P35453 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXD13P35453 AC244505.3-201ENST00000454598 187 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 ELOCP12-201ENST00000458706 328 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 snoU13.7-201ENST00000459220 104 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 RPL21P71-201ENST00000465598 459 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXD13P35453 BNIP3P41-201ENST00000503774 571 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 AC119751.4-201ENST00000507498 357 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXD13P35453 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD13P35453 AC034205.1-201ENST00000520621 638 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 AP001207.1-201ENST00000524051 481 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXD13P35453 OR8K4P-201ENST00000534608 872 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 AC087897.1-201ENST00000550134 156 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXD13P35453 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXD13P35453 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXD13P35453 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD13P35453 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXD13P35453 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXD13P35453 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXD13P35453 MTND6P33-201ENST00000571794 183 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 MIR3138-201ENST00000585238 82 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXD13P35453 AL161729.3-201ENST00000603533 673 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 AL391834.2-201ENST00000609982 546 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 BX323046.1-201ENST00000610145 535 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 AC114781.5-201ENST00000615297 108 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 AL391262.2-201ENST00000622466 494 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 MIR6715B-201ENST00000637172 77 ntBASIC4.67□□□□□ -1.66
HOXD13P35453 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD13P35453 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD13P35453 DBF4P1-201ENST00000412976 1892 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXD13P35453 MTND4P26-201ENST00000415971 1359 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXD13P35453 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD13P35453 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD13P35453 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD13P35453 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
HOXD13P35453 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXD13P35453 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HOXD13P35453 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD13P35453 OR52B1P-201ENST00000316506 909 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXD13P35453 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXD13P35453 RNU6-444P-201ENST00000383988 108 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 MCTS2P-201ENST00000394552 546 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 AL161909.1-201ENST00000397390 712 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 AC136624.1-201ENST00000400791 413 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 FABP12P1-201ENST00000401911 322 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 SFR1P1-201ENST00000403720 688 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.66□□□□□ -1.66
HOXD13P35453 AL161631.1-201ENST00000417933 486 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 AC008280.1-201ENST00000418851 412 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 USP9YP21-201ENST00000420603 432 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 SFR1P2-201ENST00000421841 730 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 AC009480.2-201ENST00000422916 432 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 CHIAP3-201ENST00000423668 1133 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 AC011998.1-201ENST00000433403 117 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms