Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4□□□□□ -1.77
XRCC1P18887 RPL36AP13-201ENST00000457490 317 ntBASIC4□□□□□ -1.77
XRCC1P18887 AC108729.2-201ENST00000476543 840 ntBASIC4□□□□□ -1.77
XRCC1P18887 MTND6P6-201ENST00000478031 263 ntBASIC4□□□□□ -1.77
XRCC1P18887 TPT1P3-201ENST00000492841 512 ntBASIC4□□□□□ -1.77
XRCC1P18887 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4□□□□□ -1.77
XRCC1P18887 AC098799.1-201ENST00000504752 800 ntBASIC4□□□□□ -1.77
XRCC1P18887 MIR2114-201ENST00000516645 80 ntBASIC4□□□□□ -1.77
XRCC1P18887 RNA5SP143-201ENST00000516936 115 ntBASIC4□□□□□ -1.77
XRCC1P18887 CIR1P1-201ENST00000524055 1133 ntBASIC4□□□□□ -1.77
XRCC1P18887 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4□□□□□ -1.77
XRCC1P18887 POLR2KP1-201ENST00000553226 168 ntBASIC4□□□□□ -1.77
XRCC1P18887 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4□□□□□ -1.77
XRCC1P18887 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4□□□□□ -1.77
XRCC1P18887 AC093227.2-201ENST00000589357 285 ntBASIC4□□□□□ -1.77
XRCC1P18887 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4□□□□□ -1.77
XRCC1P18887 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4□□□□□ -1.77
XRCC1P18887 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4□□□□□ -1.77
XRCC1P18887 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4□□□□□ -1.77
XRCC1P18887 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4□□□□□ -1.77
XRCC1P18887 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4□□□□□ -1.77
XRCC1P18887 MIR486-1-201ENST00000612171 68 ntBASIC4□□□□□ -1.77
XRCC1P18887 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4□□□□□ -1.77
XRCC1P18887 AC073592.7-201ENST00000623659 507 ntBASIC4□□□□□ -1.77
XRCC1P18887 AC015726.3-201ENST00000624501 418 ntBASIC4□□□□□ -1.77
XRCC1P18887 AP005264.7-201ENST00000625003 745 ntBASIC4□□□□□ -1.77
XRCC1P18887 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4□□□□□ -1.77
XRCC1P18887 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4□□□□□ -1.77
XRCC1P18887 AC114546.3-201ENST00000623582 1734 ntBASIC4□□□□□ -1.77
XRCC1P18887 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.99□□□□□ -1.77
XRCC1P18887 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
XRCC1P18887 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
XRCC1P18887 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.99□□□□□ -1.77
XRCC1P18887 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
XRCC1P18887 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
XRCC1P18887 AC008725.1-201ENST00000605123 2263 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
XRCC1P18887 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.99□□□□□ -1.77
XRCC1P18887 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
XRCC1P18887 MIR142-201ENST00000384835 87 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
XRCC1P18887 RPL21P65-201ENST00000406094 466 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 RN7SKP56-201ENST00000410513 331 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 LINC01881-201ENST00000416103 412 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 AL357078.2-201ENST00000416486 427 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 LINC01347-201ENST00000417964 355 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 USP12PY-201ENST00000427677 1064 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 AC087650.1-201ENST00000431445 468 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 RPL7P28-201ENST00000437739 740 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 RPS27P5-201ENST00000444247 244 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.99□□□□□ -1.77
XRCC1P18887 AC239809.1-201ENST00000450470 217 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 AL645939.1-201ENST00000453429 797 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
XRCC1P18887 AC020898.1-201ENST00000474167 787 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 AC104687.1-201ENST00000485829 412 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.99□□□□□ -1.77
XRCC1P18887 AC010468.3-201ENST00000508225 458 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
XRCC1P18887 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
XRCC1P18887 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.99□□□□□ -1.77
XRCC1P18887 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.99□□□□□ -1.77
XRCC1P18887 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.99□□□□□ -1.77
XRCC1P18887 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.99□□□□□ -1.77
XRCC1P18887 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.99□□□□□ -1.77
XRCC1P18887 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.99□□□□□ -1.77
XRCC1P18887 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.99□□□□□ -1.77
XRCC1P18887 AGGF1P6-201ENST00000569213 976 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.99□□□□□ -1.77
XRCC1P18887 MIR4286-201ENST00000580651 93 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.99□□□□□ -1.77
XRCC1P18887 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.99□□□□□ -1.77
XRCC1P18887 AC022916.3-201ENST00000592961 742 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 AC011374.2-201ENST00000607135 526 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 AL355816.1-201ENST00000607951 118 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 AC009318.3-201ENST00000616916 503 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 AC116563.2-201ENST00000624751 535 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.99□□□□□ -1.77
XRCC1P18887 FRG1DP-201ENST00000635586 771 ntBASIC3.99□□□□□ -1.77
XRCC1P18887 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.99□□□□□ -1.77
XRCC1P18887 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
XRCC1P18887 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
XRCC1P18887 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
XRCC1P18887 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
XRCC1P18887 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
XRCC1P18887 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
XRCC1P18887 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.98□□□□□ -1.77
XRCC1P18887 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
XRCC1P18887 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
XRCC1P18887 RNU6-252P-201ENST00000363232 107 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 Y_RNA.126-201ENST00000363382 111 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 RN7SKP280-201ENST00000364196 304 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
XRCC1P18887 UBE2V1P11-201ENST00000411559 285 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 HSPE1P12-201ENST00000412576 301 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 RPL17P36-201ENST00000420302 549 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 CYP4F29P-201ENST00000420685 446 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.98□□□□□ -1.77
XRCC1P18887 AC073069.1-201ENST00000428657 441 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms