Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.36□□□□□ -1.55
ATF4P18848 SEPT14P2-201ENST00000453405 183 ntBASIC5.36□□□□□ -1.55
ATF4P18848 RAD23BP3-201ENST00000454157 1152 ntBASIC5.36□□□□□ -1.55
ATF4P18848 BX276092.8-201ENST00000455722 250 ntBASIC5.36□□□□□ -1.55
ATF4P18848 SNORA81.1-201ENST00000458922 177 ntBASIC5.36□□□□□ -1.55
ATF4P18848 AC083798.1-201ENST00000472671 131 ntBASIC5.36□□□□□ -1.55
ATF4P18848 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATF4P18848 AC068305.1-201ENST00000497406 726 ntBASIC5.36□□□□□ -1.55
ATF4P18848 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.36□□□□□ -1.55
ATF4P18848 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.36□□□□□ -1.55
ATF4P18848 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.36□□□□□ -1.55
ATF4P18848 SEPT14P4-201ENST00000513445 186 ntBASIC5.36□□□□□ -1.55
ATF4P18848 Y_RNA.702-201ENST00000516843 96 ntBASIC5.36□□□□□ -1.55
ATF4P18848 RNU6-1220P-201ENST00000517126 108 ntBASIC5.36□□□□□ -1.55
ATF4P18848 AC008694.2-201ENST00000517591 306 ntBASIC5.36□□□□□ -1.55
ATF4P18848 FO082796.1-201ENST00000523795 183 ntBASIC5.36□□□□□ -1.55
ATF4P18848 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.36□□□□□ -1.55
ATF4P18848 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.36□□□□□ -1.55
ATF4P18848 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.36□□□□□ -1.55
ATF4P18848 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.36□□□□□ -1.55
ATF4P18848 AL359219.2-201ENST00000555184 348 ntBASIC5.36□□□□□ -1.55
ATF4P18848 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC5.36□□□□□ -1.55
ATF4P18848 AL133153.1-201ENST00000557756 303 ntBASIC5.36□□□□□ -1.55
ATF4P18848 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.36□□□□□ -1.55
ATF4P18848 AC063977.7-201ENST00000594454 337 ntBASIC5.36□□□□□ -1.55
ATF4P18848 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.36□□□□□ -1.55
ATF4P18848 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.36□□□□□ -1.55
ATF4P18848 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.36□□□□□ -1.55
ATF4P18848 AC022106.2-201ENST00000620114 757 ntBASIC5.36□□□□□ -1.55
ATF4P18848 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC5.36□□□□□ -1.55
ATF4P18848 CYP4F35P-202ENST00000636121 390 ntBASIC5.36□□□□□ -1.55
ATF4P18848 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.36□□□□□ -1.55
ATF4P18848 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.36□□□□□ -1.55
ATF4P18848 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATF4P18848 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATF4P18848 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.36□□□□□ -1.55
ATF4P18848 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC5.36□□□□□ -1.55
ATF4P18848 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.36□□□□□ -1.55
ATF4P18848 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.36□□□□□ -1.55
ATF4P18848 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
ATF4P18848 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
ATF4P18848 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.35□□□□□ -1.55
ATF4P18848 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
ATF4P18848 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATF4P18848 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.35□□□□□ -1.55
ATF4P18848 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATF4P18848 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATF4P18848 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC5.35□□□□□ -1.55
ATF4P18848 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATF4P18848 RNU5E-8P-201ENST00000363502 116 ntBASIC5.35□□□□□ -1.55
ATF4P18848 RNA5SP442-201ENST00000365050 107 ntBASIC5.35□□□□□ -1.55
ATF4P18848 RN7SKP69-201ENST00000365390 305 ntBASIC5.35□□□□□ -1.55
ATF4P18848 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
ATF4P18848 AC090114.1-201ENST00000393266 448 ntBASIC5.35□□□□□ -1.55
ATF4P18848 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATF4P18848 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC5.35□□□□□ -1.55
ATF4P18848 SNRPEP10-201ENST00000420249 274 ntBASIC5.35□□□□□ -1.55
ATF4P18848 BEND7P1-201ENST00000422058 457 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.35□□□□□ -1.55
ATF4P18848 CYP4F34P-201ENST00000425951 481 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AC009303.1-201ENST00000426307 352 ntBASIC5.35□□□□□ -1.55
ATF4P18848 ZNF863P-201ENST00000426746 417 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.35□□□□□ -1.55
ATF4P18848 RPSAP65-201ENST00000429660 595 ntBASIC5.35□□□□□ -1.55
ATF4P18848 RBMY2QP-201ENST00000429799 1147 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.35□□□□□ -1.55
ATF4P18848 OR4K11P-201ENST00000431829 904 ntBASIC5.35□□□□□ -1.55
ATF4P18848 RPL23AP30-201ENST00000432419 501 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.35□□□□□ -1.55
ATF4P18848 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.35□□□□□ -1.55
ATF4P18848 AL663074.2-201ENST00000440621 479 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AC005297.1-201ENST00000444765 862 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AC114755.5-201ENST00000447760 831 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.35□□□□□ -1.55
ATF4P18848 AC016724.1-201ENST00000453215 421 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.35□□□□□ -1.55
ATF4P18848 RNU6-420P-201ENST00000458780 107 ntBASIC5.35□□□□□ -1.55
ATF4P18848 RNU6-261P-201ENST00000459506 102 ntBASIC5.35□□□□□ -1.55
ATF4P18848 RN7SL515P-201ENST00000463999 297 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.35□□□□□ -1.55
ATF4P18848 RPL21P42-201ENST00000488408 464 ntBASIC5.35□□□□□ -1.55
ATF4P18848 GM2AP2-201ENST00000491764 562 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.35□□□□□ -1.55
ATF4P18848 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.35□□□□□ -1.55
ATF4P18848 SCARNA24.1-201ENST00000516465 137 ntBASIC5.35□□□□□ -1.55
ATF4P18848 RNA5SP206-201ENST00000516703 121 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.35□□□□□ -1.55
ATF4P18848 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.35□□□□□ -1.55
ATF4P18848 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.35□□□□□ -1.55
ATF4P18848 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC5.35□□□□□ -1.55
ATF4P18848 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.35□□□□□ -1.55
ATF4P18848 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.35□□□□□ -1.55
ATF4P18848 AL135978.1-201ENST00000553618 1266 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AL109766.1-201ENST00000555080 552 ntBASIC5.35□□□□□ -1.55
ATF4P18848 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.35□□□□□ -1.55
ATF4P18848 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.35□□□□□ -1.55
ATF4P18848 AL031846.1-201ENST00000560933 314 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.35□□□□□ -1.55
ATF4P18848 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.35□□□□□ -1.55
ATF4P18848 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms