Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC091860.1-201ENST00000505723 432 ntBASIC4.78□□□□□ -1.64
MMP3P08254 AC119751.1-201ENST00000513357 765 ntBASIC4.78□□□□□ -1.64
MMP3P08254 AC119751.5-201ENST00000514077 770 ntBASIC4.78□□□□□ -1.64
MMP3P08254 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.78□□□□□ -1.64
MMP3P08254 MTATP6P15-201ENST00000527233 835 ntBASIC4.78□□□□□ -1.64
MMP3P08254 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.78□□□□□ -1.64
MMP3P08254 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.78□□□□□ -1.64
MMP3P08254 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
MMP3P08254 AL352979.3-201ENST00000553515 247 ntBASIC4.78□□□□□ -1.64
MMP3P08254 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.78□□□□□ -1.64
MMP3P08254 MTCO1P40-201ENST00000574371 625 ntBASIC4.78□□□□□ -1.64
MMP3P08254 PCNAP1-202ENST00000595299 752 ntBASIC4.78□□□□□ -1.64
MMP3P08254 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.78□□□□□ -1.64
MMP3P08254 Z99129.2-201ENST00000619967 314 ntBASIC4.78□□□□□ -1.64
MMP3P08254 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MMP3P08254 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.78□□□□□ -1.64
MMP3P08254 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MMP3P08254 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
MMP3P08254 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
MMP3P08254 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.77□□□□□ -1.65
MMP3P08254 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
MMP3P08254 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
MMP3P08254 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
MMP3P08254 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
MMP3P08254 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.77□□□□□ -1.65
MMP3P08254 RNU1-20P-201ENST00000363314 162 ntBASIC4.77□□□□□ -1.65
MMP3P08254 SNORA62.2-201ENST00000364672 152 ntBASIC4.77□□□□□ -1.65
MMP3P08254 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.77□□□□□ -1.65
MMP3P08254 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.77□□□□□ -1.65
MMP3P08254 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.77□□□□□ -1.65
MMP3P08254 AP000357.1-201ENST00000409926 1165 ntBASIC4.77□□□□□ -1.65
MMP3P08254 AL513175.2-201ENST00000422071 443 ntBASIC4.77□□□□□ -1.65
MMP3P08254 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.77□□□□□ -1.65
MMP3P08254 RPL7P34-201ENST00000433316 712 ntBASIC4.77□□□□□ -1.65
MMP3P08254 CEACAMP1-201ENST00000434624 1035 ntBASIC4.77□□□□□ -1.65
MMP3P08254 AL356276.2-201ENST00000435919 558 ntBASIC4.77□□□□□ -1.65
MMP3P08254 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.77□□□□□ -1.65
MMP3P08254 AL162151.2-201ENST00000448875 158 ntBASIC4.77□□□□□ -1.65
MMP3P08254 RPS6P2-201ENST00000454208 705 ntBASIC4.77□□□□□ -1.65
MMP3P08254 USP9YP25-201ENST00000457708 443 ntBASIC4.77□□□□□ -1.65
MMP3P08254 RNU7-27P-201ENST00000459281 62 ntBASIC4.77□□□□□ -1.65
MMP3P08254 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.77□□□□□ -1.65
MMP3P08254 PRELID3BP4-201ENST00000515476 571 ntBASIC4.77□□□□□ -1.65
MMP3P08254 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.77□□□□□ -1.65
MMP3P08254 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.77□□□□□ -1.65
MMP3P08254 MTND4P33-201ENST00000556706 766 ntBASIC4.77□□□□□ -1.65
MMP3P08254 AC095057.3-201ENST00000567102 1157 ntBASIC4.77□□□□□ -1.65
MMP3P08254 RPL23AP97-201ENST00000568955 471 ntBASIC4.77□□□□□ -1.65
MMP3P08254 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
MMP3P08254 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.77□□□□□ -1.65
MMP3P08254 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.77□□□□□ -1.65
MMP3P08254 AC006130.2-201ENST00000586202 326 ntBASIC4.77□□□□□ -1.65
MMP3P08254 AL137072.1-201ENST00000603444 466 ntBASIC4.77□□□□□ -1.65
MMP3P08254 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.77□□□□□ -1.65
MMP3P08254 AL035411.2-201ENST00000604022 421 ntBASIC4.77□□□□□ -1.65
MMP3P08254 AL139344.1-201ENST00000605228 195 ntBASIC4.77□□□□□ -1.65
MMP3P08254 RNU4-89P-201ENST00000607443 133 ntBASIC4.77□□□□□ -1.65
MMP3P08254 AC097065.2-201ENST00000608159 533 ntBASIC4.77□□□□□ -1.65
MMP3P08254 AL158163.2-201ENST00000619110 700 ntBASIC4.77□□□□□ -1.65
MMP3P08254 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.77□□□□□ -1.65
MMP3P08254 AC010608.2-201ENST00000624830 470 ntBASIC4.77□□□□□ -1.65
MMP3P08254 AC008013.2-202ENST00000637965 364 ntBASIC4.77□□□□□ -1.65
MMP3P08254 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.77□□□□□ -1.65
MMP3P08254 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
MMP3P08254 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.77□□□□□ -1.65
MMP3P08254 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.77□□□□□ -1.65
MMP3P08254 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
MMP3P08254 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
MMP3P08254 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
MMP3P08254 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.77□□□□□ -1.65
MMP3P08254 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.77□□□□□ -1.65
MMP3P08254 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
MMP3P08254 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.76□□□□□ -1.65
MMP3P08254 ZNF876P-202ENST00000398732 1485 ntBASIC4.76□□□□□ -1.65
MMP3P08254 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
MMP3P08254 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.76□□□□□ -1.65
MMP3P08254 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.76□□□□□ -1.65
MMP3P08254 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
MMP3P08254 MTCO2P31-201ENST00000402702 684 ntBASIC4.76□□□□□ -1.65
MMP3P08254 RPL21P65-201ENST00000406094 466 ntBASIC4.76□□□□□ -1.65
MMP3P08254 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
MMP3P08254 RN7SKP247-201ENST00000411094 308 ntBASIC4.76□□□□□ -1.65
MMP3P08254 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.76□□□□□ -1.65
MMP3P08254 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.76□□□□□ -1.65
MMP3P08254 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.76□□□□□ -1.65
MMP3P08254 RPL36AP10-201ENST00000421785 322 ntBASIC4.76□□□□□ -1.65
MMP3P08254 EIF1P3-201ENST00000423841 334 ntBASIC4.76□□□□□ -1.65
MMP3P08254 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.76□□□□□ -1.65
MMP3P08254 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.76□□□□□ -1.65
MMP3P08254 CASP3P1-201ENST00000446037 609 ntBASIC4.76□□□□□ -1.65
MMP3P08254 PTENP1-201ENST00000447117 1215 ntBASIC4.76□□□□□ -1.65
MMP3P08254 CDC42P1-201ENST00000456658 548 ntBASIC4.76□□□□□ -1.65
MMP3P08254 AP000942.1-201ENST00000463969 747 ntBASIC4.76□□□□□ -1.65
MMP3P08254 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.76□□□□□ -1.65
MMP3P08254 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.76□□□□□ -1.65
MMP3P08254 AC008565.1-201ENST00000509046 885 ntBASIC4.76□□□□□ -1.65
MMP3P08254 AC018442.3-201ENST00000523025 183 ntBASIC4.76□□□□□ -1.65
MMP3P08254 AC027104.1-201ENST00000563702 681 ntBASIC4.76□□□□□ -1.65
MMP3P08254 AC145350.1-201ENST00000567426 208 ntBASIC4.76□□□□□ -1.65
MMP3P08254 MTND3P13-201ENST00000574391 343 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms