Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 AC010329.2-201ENST00000595195 2737 ntBASIC3.59□□□□□ -1.83
HLA-DQB2P05538 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DQB2P05538 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.59□□□□□ -1.84
HLA-DQB2P05538 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DQB2P05538 AC068647.1-201ENST00000489539 2265 ntBASIC3.59□□□□□ -1.84
HLA-DQB2P05538 OTUD4P1-201ENST00000237841 3067 ntBASIC3.59□□□□□ -1.84
HLA-DQB2P05538 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DQB2P05538 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AL136116.1-201ENST00000403591 381 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AMD1P2-201ENST00000412936 992 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 CYCSP4-201ENST00000429682 331 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 RPS6P12-201ENST00000432491 726 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 CDC27P1-201ENST00000445384 715 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 EIF4A1P11-201ENST00000451239 222 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 SNORD105B-201ENST00000458770 79 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AC022336.1-201ENST00000475510 337 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 FCF1P3-201ENST00000496394 590 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 SETP14-201ENST00000497538 873 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 SAP18P1-201ENST00000512058 390 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 RN7SKP13-201ENST00000515933 244 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 MED28P5-201ENST00000528254 438 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 DEFB109D-201ENST00000529497 240 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AC026333.2-201ENST00000542164 106 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 DUXAP6-201ENST00000553858 601 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 CYP2C60P-201ENST00000566088 139 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AC006116.10-201ENST00000591836 581 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AL356274.1-201ENST00000617064 410 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AC022149.2-201ENST00000621061 203 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AP006248.2-201ENST00000623309 592 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AL034408.1-202ENST00000636088 415 ntBASIC3.58□□□□□ -1.84
HLA-DQB2P05538 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQB2P05538 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 RNU6-1279P-201ENST00000383917 103 ntBASIC3.57□□□□□ -1.84
HLA-DQB2P05538 AL138878.1-201ENST00000405131 347 ntBASIC3.57□□□□□ -1.84
HLA-DQB2P05538 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 PPIAP3-201ENST00000450588 505 ntBASIC3.57□□□□□ -1.84
HLA-DQB2P05538 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 AC106707.2-201ENST00000484182 374 ntBASIC3.57□□□□□ -1.84
HLA-DQB2P05538 AC093311.1-201ENST00000506586 2021 ntBASIC3.57□□□□□ -1.84
HLA-DQB2P05538 RNU2-27P-201ENST00000516185 142 ntBASIC3.57□□□□□ -1.84
HLA-DQB2P05538 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 PAICSP4-201ENST00000517543 1253 ntBASIC3.57□□□□□ -1.84
HLA-DQB2P05538 AC026403.1-201ENST00000518938 295 ntBASIC3.57□□□□□ -1.84
HLA-DQB2P05538 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 AP000926.4-201ENST00000527351 454 ntBASIC3.57□□□□□ -1.84
HLA-DQB2P05538 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 BNIP3P38-201ENST00000601117 544 ntBASIC3.57□□□□□ -1.84
HLA-DQB2P05538 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 OR11H5P-202ENST00000641612 1325 ntBASIC3.57□□□□□ -1.84
HLA-DQB2P05538 AC009093.8-201ENST00000641769 292 ntBASIC3.57□□□□□ -1.84
HLA-DQB2P05538 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 AL161912.2-201ENST00000565707 3007 ntBASIC3.57□□□□□ -1.84
HLA-DQB2P05538 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQB2P05538 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 RNA5SP105-201ENST00000391123 113 ntBASIC3.56□□□□□ -1.84
HLA-DQB2P05538 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 AL136131.1-201ENST00000406079 803 ntBASIC3.56□□□□□ -1.84
HLA-DQB2P05538 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 CRYBB2P1-203ENST00000415709 538 ntBASIC3.56□□□□□ -1.84
HLA-DQB2P05538 OSTCP5-201ENST00000425293 453 ntBASIC3.56□□□□□ -1.84
HLA-DQB2P05538 DPY19L1P2-201ENST00000426647 915 ntBASIC3.56□□□□□ -1.84
HLA-DQB2P05538 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms