Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC245389.2-201ENST00000616023 576 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC242843.1-201ENST00000618702 573 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AL139089.1-201ENST00000620372 975 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AL049536.1-201ENST00000625043 744 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 OR6C71P-202ENST00000641886 1107 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 HSPA8P19-201ENST00000505359 1517 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC100871.1-201ENST00000507871 1456 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQA1P01909 AL118496.1-201ENST00000440201 1812 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 MTND5P11-201ENST00000511037 1812 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQA1P01909 MTCO1P14-201ENST00000441695 1559 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQA1P01909 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DQA1P01909 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DQA1P01909 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
HLA-DQA1P01909 RNU6-792P-201ENST00000363490 107 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DQA1P01909 RNA5SP397-201ENST00000391323 118 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DQA1P01909 AC009237.5-201ENST00000414271 501 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQA1P01909 SLC4A1APP1-201ENST00000419995 602 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 TRIM60P3Y-201ENST00000432201 673 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 AL512326.1-201ENST00000443050 721 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DQA1P01909 AC092685.1-201ENST00000447960 1243 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 AC017099.1-201ENST00000448261 1028 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 RPL5P32-201ENST00000454085 879 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 AC006539.3-201ENST00000454258 129 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DQA1P01909 NDUFA12P1-201ENST00000455914 406 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 RPL21P126-201ENST00000470049 478 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 AC007537.2-201ENST00000472093 511 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 TRBV8-2-201ENST00000475637 270 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 RPL29P14-201ENST00000495837 428 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DQA1P01909 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3□□□□□ -1.93
HLA-DQA1P01909 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DQA1P01909 RN7SKP209-201ENST00000516888 304 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DQA1P01909 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DQA1P01909 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DQA1P01909 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DQA1P01909 AP003168.1-201ENST00000530091 307 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 OSBPL9P3-201ENST00000534523 595 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DQA1P01909 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DQA1P01909 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3□□□□□ -1.93
HLA-DQA1P01909 RPL23AP87-202ENST00000573039 466 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DQA1P01909 MIR4443-201ENST00000585052 53 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DQA1P01909 AC011492.1-201ENST00000600023 315 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQA1P01909 ABI1P1-201ENST00000603375 1120 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 AL365503.1-201ENST00000605247 905 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DQA1P01909 AL162574.2-201ENST00000614618 657 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 AC090246.1-201ENST00000616499 426 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 AL445493.3-201ENST00000619568 477 ntBASIC3□□□□□ -1.93
HLA-DQA1P01909 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DQA1P01909 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DQA1P01909 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQA1P01909 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
HLA-DQA1P01909 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQA1P01909 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQA1P01909 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQA1P01909 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HLA-DQA1P01909 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
HLA-DQA1P01909 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DQA1P01909 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DQA1P01909 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DQA1P01909 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DQA1P01909 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DQA1P01909 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DQA1P01909 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DQA1P01909 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DQA1P01909 MIR659-201ENST00000384963 97 ntBASIC2.99□□□□□ -1.93
HLA-DQA1P01909 AL590704.1-201ENST00000402856 794 ntBASIC2.99□□□□□ -1.93
HLA-DQA1P01909 AL049697.2-201ENST00000403708 294 ntBASIC2.99□□□□□ -1.93
HLA-DQA1P01909 RNU4-27P-201ENST00000410889 139 ntBASIC2.99□□□□□ -1.93
HLA-DQA1P01909 SNORA57.3-201ENST00000411095 141 ntBASIC2.99□□□□□ -1.93
HLA-DQA1P01909 HMGB3P31-201ENST00000413333 595 ntBASIC2.99□□□□□ -1.93
HLA-DQA1P01909 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.99□□□□□ -1.93
HLA-DQA1P01909 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DQA1P01909 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC2.99□□□□□ -1.93
HLA-DQA1P01909 RPL31P12-201ENST00000422587 358 ntBASIC2.99□□□□□ -1.93
HLA-DQA1P01909 VN1R42P-201ENST00000424651 344 ntBASIC2.99□□□□□ -1.93
HLA-DQA1P01909 OR5AW1P-201ENST00000426334 1006 ntBASIC2.99□□□□□ -1.93
HLA-DQA1P01909 AL031736.2-201ENST00000426573 787 ntBASIC2.99□□□□□ -1.93
HLA-DQA1P01909 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DQA1P01909 AL512661.1-201ENST00000434586 1253 ntBASIC2.99□□□□□ -1.93
HLA-DQA1P01909 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.99□□□□□ -1.93
HLA-DQA1P01909 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms