Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTDNEP1O95476 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.06□□□□□ -1.76
CTDNEP1O95476 AP000563.1-201ENST00000490865 758 ntBASIC4.06□□□□□ -1.76
CTDNEP1O95476 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.06□□□□□ -1.76
CTDNEP1O95476 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.06□□□□□ -1.76
CTDNEP1O95476 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTDNEP1O95476 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
CTDNEP1O95476 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTDNEP1O95476 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.06□□□□□ -1.76
CTDNEP1O95476 AP000926.4-201ENST00000527351 454 ntBASIC4.06□□□□□ -1.76
CTDNEP1O95476 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.06□□□□□ -1.76
CTDNEP1O95476 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.06□□□□□ -1.76
CTDNEP1O95476 AC112230.1-201ENST00000604342 547 ntBASIC4.06□□□□□ -1.76
CTDNEP1O95476 AP003355.3-201ENST00000623465 114 ntBASIC4.06□□□□□ -1.76
CTDNEP1O95476 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTDNEP1O95476 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTDNEP1O95476 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTDNEP1O95476 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTDNEP1O95476 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTDNEP1O95476 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTDNEP1O95476 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 Y_RNA.126-201ENST00000363382 111 ntBASIC4.05□□□□□ -1.76
CTDNEP1O95476 AP002088.1-201ENST00000382740 395 ntBASIC4.05□□□□□ -1.76
CTDNEP1O95476 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 CRYBB2P1-203ENST00000415709 538 ntBASIC4.05□□□□□ -1.76
CTDNEP1O95476 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 AP000907.1-201ENST00000428428 510 ntBASIC4.05□□□□□ -1.76
CTDNEP1O95476 RPL21P110-201ENST00000433345 446 ntBASIC4.05□□□□□ -1.76
CTDNEP1O95476 MRPS18BP2-201ENST00000434310 759 ntBASIC4.05□□□□□ -1.76
CTDNEP1O95476 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTDNEP1O95476 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTDNEP1O95476 MORF4L1P4-201ENST00000450245 976 ntBASIC4.05□□□□□ -1.76
CTDNEP1O95476 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 RN7SL542P-201ENST00000467147 294 ntBASIC4.05□□□□□ -1.76
CTDNEP1O95476 AP001960.1-201ENST00000506494 658 ntBASIC4.05□□□□□ -1.76
CTDNEP1O95476 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 MTND4LP31-201ENST00000514859 294 ntBASIC4.05□□□□□ -1.76
CTDNEP1O95476 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTDNEP1O95476 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 AC106785.3-201ENST00000564064 847 ntBASIC4.05□□□□□ -1.76
CTDNEP1O95476 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTDNEP1O95476 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 AC010591.1-201ENST00000603941 649 ntBASIC4.05□□□□□ -1.76
CTDNEP1O95476 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTDNEP1O95476 RMST_8.1-201ENST00000610287 165 ntBASIC4.05□□□□□ -1.76
CTDNEP1O95476 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 AC009093.8-201ENST00000641769 292 ntBASIC4.05□□□□□ -1.76
CTDNEP1O95476 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTDNEP1O95476 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.05□□□□□ -1.76
CTDNEP1O95476 Z73965.1-201ENST00000623412 2297 ntBASIC4.05□□□□□ -1.76
CTDNEP1O95476 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTDNEP1O95476 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTDNEP1O95476 AL356274.2-201ENST00000624379 3752 ntBASIC4.04□□□□□ -1.76
CTDNEP1O95476 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.04□□□□□ -1.76
CTDNEP1O95476 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.04□□□□□ -1.76
CTDNEP1O95476 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTDNEP1O95476 RPL12P46-201ENST00000436610 195 ntBASIC4.04□□□□□ -1.76
CTDNEP1O95476 AL357552.1-201ENST00000445254 415 ntBASIC4.04□□□□□ -1.76
CTDNEP1O95476 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.04□□□□□ -1.76
CTDNEP1O95476 AC073387.1-201ENST00000453261 709 ntBASIC4.04□□□□□ -1.76
CTDNEP1O95476 AC106707.2-201ENST00000484182 374 ntBASIC4.04□□□□□ -1.76
CTDNEP1O95476 TRMT10BP1-201ENST00000519377 943 ntBASIC4.04□□□□□ -1.76
CTDNEP1O95476 AC109635.6-201ENST00000525487 1113 ntBASIC4.04□□□□□ -1.76
CTDNEP1O95476 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.04□□□□□ -1.76
CTDNEP1O95476 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.04□□□□□ -1.76
CTDNEP1O95476 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.04□□□□□ -1.76
CTDNEP1O95476 MIR4425-201ENST00000580572 84 ntBASIC4.04□□□□□ -1.76
CTDNEP1O95476 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.04□□□□□ -1.76
CTDNEP1O95476 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.04□□□□□ -1.76
CTDNEP1O95476 MIR3922-201ENST00000585192 84 ntBASIC4.04□□□□□ -1.76
CTDNEP1O95476 AC006116.10-201ENST00000591836 581 ntBASIC4.04□□□□□ -1.76
CTDNEP1O95476 AC010615.3-201ENST00000597319 394 ntBASIC4.04□□□□□ -1.76
CTDNEP1O95476 NF1P10-201ENST00000613227 742 ntBASIC4.04□□□□□ -1.76
CTDNEP1O95476 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTDNEP1O95476 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.04□□□□□ -1.76
CTDNEP1O95476 AC026951.1-201ENST00000559530 2459 ntBASIC4.04□□□□□ -1.76
CTDNEP1O95476 MFSD8-233ENST00000641482 4860 ntBASIC4.04□□□□□ -1.76
CTDNEP1O95476 BX005019.1-201ENST00000561881 1810 ntBASIC4.04□□□□□ -1.76
CTDNEP1O95476 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
CTDNEP1O95476 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTDNEP1O95476 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTDNEP1O95476 MTND4P10-201ENST00000446199 1363 ntBASIC4.03□□□□□ -1.76
CTDNEP1O95476 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CTDNEP1O95476 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTDNEP1O95476 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTDNEP1O95476 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.03□□□□□ -1.76
CTDNEP1O95476 OR6K4P-201ENST00000423179 955 ntBASIC4.03□□□□□ -1.76
CTDNEP1O95476 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.03□□□□□ -1.76
CTDNEP1O95476 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.03□□□□□ -1.76
CTDNEP1O95476 AL035551.1-201ENST00000446931 348 ntBASIC4.03□□□□□ -1.76
CTDNEP1O95476 RBMY2UP-201ENST00000453474 324 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms