Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.36□□□□□ -1.71
UBE4BO95155 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.36□□□□□ -1.71
UBE4BO95155 SNRPGP1-201ENST00000553864 222 ntBASIC4.36□□□□□ -1.71
UBE4BO95155 AC106785.1-201ENST00000565935 262 ntBASIC4.36□□□□□ -1.71
UBE4BO95155 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.36□□□□□ -1.71
UBE4BO95155 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.36□□□□□ -1.71
UBE4BO95155 PCNAP1-202ENST00000595299 752 ntBASIC4.36□□□□□ -1.71
UBE4BO95155 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.36□□□□□ -1.71
UBE4BO95155 AL591424.2-201ENST00000617023 128 ntBASIC4.36□□□□□ -1.71
UBE4BO95155 AL139089.1-201ENST00000620372 975 ntBASIC4.36□□□□□ -1.71
UBE4BO95155 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.36□□□□□ -1.71
UBE4BO95155 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
UBE4BO95155 LINC02471-203ENST00000641941 4752 ntBASIC4.36□□□□□ -1.71
UBE4BO95155 UBE3AP2-201ENST00000429033 2259 ntBASIC4.36□□□□□ -1.71
UBE4BO95155 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
UBE4BO95155 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
UBE4BO95155 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.35□□□□□ -1.71
UBE4BO95155 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
UBE4BO95155 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.35□□□□□ -1.71
UBE4BO95155 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.35□□□□□ -1.71
UBE4BO95155 AC018529.3-201ENST00000624212 2254 ntBASIC4.35□□□□□ -1.71
UBE4BO95155 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
UBE4BO95155 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UBE4BO95155 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UBE4BO95155 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
UBE4BO95155 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.35□□□□□ -1.71
UBE4BO95155 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.35□□□□□ -1.71
UBE4BO95155 TCEA1P4-201ENST00000415066 844 ntBASIC4.35□□□□□ -1.71
UBE4BO95155 LINC01347-201ENST00000417964 355 ntBASIC4.35□□□□□ -1.71
UBE4BO95155 ELOCP11-201ENST00000436690 332 ntBASIC4.35□□□□□ -1.71
UBE4BO95155 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.35□□□□□ -1.71
UBE4BO95155 MTCO3P43-201ENST00000440974 771 ntBASIC4.35□□□□□ -1.71
UBE4BO95155 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.35□□□□□ -1.71
UBE4BO95155 ELOCP16-201ENST00000444494 332 ntBASIC4.35□□□□□ -1.71
UBE4BO95155 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.35□□□□□ -1.71
UBE4BO95155 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.35□□□□□ -1.71
UBE4BO95155 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.35□□□□□ -1.71
UBE4BO95155 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.35□□□□□ -1.71
UBE4BO95155 AC110792.1-201ENST00000491826 472 ntBASIC4.35□□□□□ -1.71
UBE4BO95155 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.35□□□□□ -1.71
UBE4BO95155 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.35□□□□□ -1.71
UBE4BO95155 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.35□□□□□ -1.71
UBE4BO95155 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.35□□□□□ -1.71
UBE4BO95155 CIR1P1-201ENST00000524055 1133 ntBASIC4.35□□□□□ -1.71
UBE4BO95155 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.35□□□□□ -1.71
UBE4BO95155 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.35□□□□□ -1.71
UBE4BO95155 MIR4429-201ENST00000580105 73 ntBASIC4.35□□□□□ -1.71
UBE4BO95155 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.35□□□□□ -1.71
UBE4BO95155 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
UBE4BO95155 AC093227.2-201ENST00000589357 285 ntBASIC4.35□□□□□ -1.71
UBE4BO95155 AP003117.1-201ENST00000602771 554 ntBASIC4.35□□□□□ -1.71
UBE4BO95155 AC079610.2-201ENST00000604818 690 ntBASIC4.35□□□□□ -1.71
UBE4BO95155 AL450270.1-201ENST00000606160 391 ntBASIC4.35□□□□□ -1.71
UBE4BO95155 AC004775.1-201ENST00000607389 753 ntBASIC4.35□□□□□ -1.71
UBE4BO95155 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.35□□□□□ -1.71
UBE4BO95155 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.35□□□□□ -1.71
UBE4BO95155 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
UBE4BO95155 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UBE4BO95155 MTND4P21-201ENST00000453886 1357 ntBASIC4.35□□□□□ -1.71
UBE4BO95155 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
UBE4BO95155 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UBE4BO95155 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
UBE4BO95155 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
UBE4BO95155 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
UBE4BO95155 MAPK10-253ENST00000641010 4072 ntBASIC4.34□□□□□ -1.71
UBE4BO95155 RLIMP1-201ENST00000339626 1680 ntBASIC4.34□□□□□ -1.71
UBE4BO95155 ZNF962P-201ENST00000443465 3140 ntBASIC4.34□□□□□ -1.71
UBE4BO95155 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
UBE4BO95155 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
UBE4BO95155 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.34□□□□□ -1.71
UBE4BO95155 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.34□□□□□ -1.71
UBE4BO95155 RNU4-6P-201ENST00000410804 122 ntBASIC4.34□□□□□ -1.71
UBE4BO95155 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
UBE4BO95155 ARL2BPP3-201ENST00000421226 480 ntBASIC4.34□□□□□ -1.71
UBE4BO95155 RPL7P29-201ENST00000437151 728 ntBASIC4.34□□□□□ -1.71
UBE4BO95155 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.34□□□□□ -1.71
UBE4BO95155 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.34□□□□□ -1.71
UBE4BO95155 Z95327.1-201ENST00000446082 482 ntBASIC4.34□□□□□ -1.71
UBE4BO95155 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.34□□□□□ -1.71
UBE4BO95155 RPS17P13-201ENST00000448974 407 ntBASIC4.34□□□□□ -1.71
UBE4BO95155 AL451050.1-201ENST00000450126 415 ntBASIC4.34□□□□□ -1.71
UBE4BO95155 RPL7P31-201ENST00000450192 724 ntBASIC4.34□□□□□ -1.71
UBE4BO95155 AC133473.1-201ENST00000455173 299 ntBASIC4.34□□□□□ -1.71
UBE4BO95155 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.34□□□□□ -1.71
UBE4BO95155 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.34□□□□□ -1.71
UBE4BO95155 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.34□□□□□ -1.71
UBE4BO95155 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
UBE4BO95155 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.34□□□□□ -1.71
UBE4BO95155 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.34□□□□□ -1.71
UBE4BO95155 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.34□□□□□ -1.71
UBE4BO95155 OR4U1P-201ENST00000554958 912 ntBASIC4.34□□□□□ -1.71
UBE4BO95155 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.34□□□□□ -1.71
UBE4BO95155 LINC00557-201ENST00000563184 1279 ntBASIC4.34□□□□□ -1.71
UBE4BO95155 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.34□□□□□ -1.71
UBE4BO95155 AC112484.5-201ENST00000624189 228 ntBASIC4.34□□□□□ -1.71
UBE4BO95155 HPVC1-201ENST00000629899 1198 ntBASIC4.34□□□□□ -1.71
UBE4BO95155 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.34□□□□□ -1.71
UBE4BO95155 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
UBE4BO95155 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
UBE4BO95155 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms