Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
UPK1BO75841 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC3.25□□□□□ -1.89
UPK1BO75841 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.25□□□□□ -1.89
UPK1BO75841 AL732372.2-225ENST00000642124 456 ntBASIC3.25□□□□□ -1.89
UPK1BO75841 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
UPK1BO75841 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.25□□□□□ -1.89
UPK1BO75841 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
UPK1BO75841 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1BO75841 AL592494.2-201ENST00000425455 1548 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 AC024560.2-201ENST00000507981 1497 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1BO75841 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
UPK1BO75841 SRP72P2-201ENST00000344851 1979 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1BO75841 MIR148B-201ENST00000362252 99 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 RNA5SP383-201ENST00000362934 120 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1BO75841 AL645927.1-201ENST00000396783 406 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 MIR298-201ENST00000401212 88 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 RNU2-6P-201ENST00000411404 190 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 PRELID3BP11-201ENST00000414230 479 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 AC093578.1-201ENST00000415219 368 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.24□□□□□ -1.89
UPK1BO75841 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.24□□□□□ -1.89
UPK1BO75841 HMGB3P20-201ENST00000417997 600 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC3.24□□□□□ -1.89
UPK1BO75841 AC011998.1-201ENST00000433403 117 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 AC023347.2-201ENST00000433994 462 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 RPL7P29-201ENST00000437151 728 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.24□□□□□ -1.89
UPK1BO75841 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.24□□□□□ -1.89
UPK1BO75841 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1BO75841 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.24□□□□□ -1.89
UPK1BO75841 AC099563.1-201ENST00000456086 418 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 AC006463.2-201ENST00000473326 348 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.24□□□□□ -1.89
UPK1BO75841 TRAV31-201ENST00000502780 342 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1BO75841 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.24□□□□□ -1.89
UPK1BO75841 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.24□□□□□ -1.89
UPK1BO75841 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.24□□□□□ -1.89
UPK1BO75841 SNORA31.13-201ENST00000516624 135 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 SNORA64.4-201ENST00000516632 81 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 IGHVII-60-1-201ENST00000519079 256 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1BO75841 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.24□□□□□ -1.89
UPK1BO75841 TRAV8-5-201ENST00000537369 341 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC3.24□□□□□ -1.89
UPK1BO75841 AC084783.1-201ENST00000565846 910 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 MIR3614-201ENST00000581261 86 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.24□□□□□ -1.89
UPK1BO75841 CBX3P2-202ENST00000583365 535 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 AC068790.7-201ENST00000602347 528 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.24□□□□□ -1.89
UPK1BO75841 AC012531.5-201ENST00000611375 151 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 AC087385.3-201ENST00000620477 187 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 AL357559.1-201ENST00000622228 274 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 U6.98-201ENST00000637157 84 ntBASIC3.24□□□□□ -1.89
UPK1BO75841 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.24□□□□□ -1.89
UPK1BO75841 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1BO75841 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.24□□□□□ -1.89
UPK1BO75841 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
UPK1BO75841 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1BO75841 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
UPK1BO75841 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1BO75841 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1BO75841 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
UPK1BO75841 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1BO75841 AC068647.1-201ENST00000489539 2265 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.23□□□□□ -1.89
UPK1BO75841 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.23□□□□□ -1.89
UPK1BO75841 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.23□□□□□ -1.89
UPK1BO75841 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1BO75841 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
UPK1BO75841 RN7SKP149-201ENST00000363008 344 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.23□□□□□ -1.89
UPK1BO75841 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1BO75841 SNORA17A-201ENST00000391185 133 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
UPK1BO75841 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1BO75841 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
UPK1BO75841 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.23□□□□□ -1.89
UPK1BO75841 RN7SKP273-201ENST00000411392 314 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.23□□□□□ -1.89
UPK1BO75841 HMGB3P23-201ENST00000414981 585 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1BO75841 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.23□□□□□ -1.89
UPK1BO75841 LINC01347-201ENST00000417964 355 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 RPL31P45-201ENST00000419532 356 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 AL035458.1-201ENST00000433096 585 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 SNORA71B-202ENST00000439232 272 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1BO75841 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.23□□□□□ -1.89
UPK1BO75841 AC006480.1-201ENST00000449887 378 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 HMGN1P18-201ENST00000457642 277 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 RN7SL860P-201ENST00000473738 223 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 RPL12P20-201ENST00000475538 479 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.23□□□□□ -1.89
UPK1BO75841 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.23□□□□□ -1.89
UPK1BO75841 KCTD9P5-201ENST00000504141 1170 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms