Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RNU4-25P-201ENST00000410569 230 ntBASIC7.27□□□□□ -1.25
RNF40O75150 AL713922.1-201ENST00000416477 747 ntBASIC7.27□□□□□ -1.25
RNF40O75150 AC012065.2-201ENST00000421295 375 ntBASIC7.27□□□□□ -1.25
RNF40O75150 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.27□□□□□ -1.25
RNF40O75150 MED28P2-201ENST00000475771 317 ntBASIC7.27□□□□□ -1.25
RNF40O75150 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.27□□□□□ -1.25
RNF40O75150 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RNF40O75150 AC008526.1-201ENST00000509149 338 ntBASIC7.27□□□□□ -1.25
RNF40O75150 Y_RNA.700-201ENST00000516806 100 ntBASIC7.27□□□□□ -1.25
RNF40O75150 IGHV3-57-201ENST00000520143 280 ntBASIC7.27□□□□□ -1.25
RNF40O75150 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC7.27□□□□□ -1.25
RNF40O75150 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF40O75150 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF40O75150 AC024224.1-201ENST00000538284 609 ntBASIC7.27□□□□□ -1.25
RNF40O75150 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.27□□□□□ -1.25
RNF40O75150 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF40O75150 AL512782.1-201ENST00000603093 364 ntBASIC7.27□□□□□ -1.25
RNF40O75150 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC7.27□□□□□ -1.25
RNF40O75150 SNORD58B-201ENST00000607313 66 ntBASIC7.27□□□□□ -1.25
RNF40O75150 EIF3FP1-201ENST00000613970 806 ntBASIC7.27□□□□□ -1.25
RNF40O75150 MIR6128-201ENST00000615528 109 ntBASIC7.27□□□□□ -1.25
RNF40O75150 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RNF40O75150 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC7.27□□□□□ -1.25
RNF40O75150 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.27□□□□□ -1.25
RNF40O75150 AL022323.4-201ENST00000623980 13120 ntBASIC7.27□□□□□ -1.25
RNF40O75150 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
RNF40O75150 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RNF40O75150 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.27□□□□□ -1.25
RNF40O75150 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF40O75150 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF40O75150 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
RNF40O75150 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RNF40O75150 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
RNF40O75150 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF40O75150 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.27□□□□□ -1.25
RNF40O75150 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.27□□□□□ -1.25
RNF40O75150 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.26□□□□□ -1.25
RNF40O75150 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.26□□□□□ -1.25
RNF40O75150 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF40O75150 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF40O75150 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
RNF40O75150 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
RNF40O75150 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF40O75150 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF40O75150 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF40O75150 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
RNF40O75150 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
RNF40O75150 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC7.26□□□□□ -1.25
RNF40O75150 RNU6-984P-201ENST00000363236 109 ntBASIC7.26□□□□□ -1.25
RNF40O75150 Y_RNA.152-201ENST00000363578 100 ntBASIC7.26□□□□□ -1.25
RNF40O75150 RNU6-82P-201ENST00000363970 107 ntBASIC7.26□□□□□ -1.25
RNF40O75150 RNA5SP394-201ENST00000364216 119 ntBASIC7.26□□□□□ -1.25
RNF40O75150 Y_RNA.483-201ENST00000384380 101 ntBASIC7.26□□□□□ -1.25
RNF40O75150 RNU6-713P-201ENST00000384761 107 ntBASIC7.26□□□□□ -1.25
RNF40O75150 RNA5SP176-201ENST00000390956 110 ntBASIC7.26□□□□□ -1.25
RNF40O75150 RPL9P21-201ENST00000392269 505 ntBASIC7.26□□□□□ -1.25
RNF40O75150 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
RNF40O75150 AL031679.1-201ENST00000400616 525 ntBASIC7.26□□□□□ -1.25
RNF40O75150 AL034374.1-201ENST00000406329 351 ntBASIC7.26□□□□□ -1.25
RNF40O75150 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.26□□□□□ -1.25
RNF40O75150 ANAPC1P1-201ENST00000426186 2145 ntBASIC7.26□□□□□ -1.25
RNF40O75150 CEP57L1P1-201ENST00000430943 1201 ntBASIC7.26□□□□□ -1.25
RNF40O75150 RPS15AP10-201ENST00000432472 382 ntBASIC7.26□□□□□ -1.25
RNF40O75150 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.26□□□□□ -1.25
RNF40O75150 AL132765.1-201ENST00000434165 553 ntBASIC7.26□□□□□ -1.25
RNF40O75150 LINC00328-2P-201ENST00000436585 219 ntBASIC7.26□□□□□ -1.25
RNF40O75150 AC105402.2-201ENST00000438503 358 ntBASIC7.26□□□□□ -1.25
RNF40O75150 AC079922.1-201ENST00000443291 359 ntBASIC7.26□□□□□ -1.25
RNF40O75150 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.26□□□□□ -1.25
RNF40O75150 OR7E116P-201ENST00000448529 957 ntBASIC7.26□□□□□ -1.25
RNF40O75150 HMGB1P7-201ENST00000450921 612 ntBASIC7.26□□□□□ -1.25
RNF40O75150 AL034369.1-201ENST00000453808 477 ntBASIC7.26□□□□□ -1.25
RNF40O75150 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC7.26□□□□□ -1.25
RNF40O75150 AC090453.1-201ENST00000495560 436 ntBASIC7.26□□□□□ -1.25
RNF40O75150 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC7.26□□□□□ -1.25
RNF40O75150 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.26□□□□□ -1.25
RNF40O75150 MINOS1P4-201ENST00000515470 318 ntBASIC7.26□□□□□ -1.25
RNF40O75150 AC022616.4-201ENST00000522985 181 ntBASIC7.26□□□□□ -1.25
RNF40O75150 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.26□□□□□ -1.25
RNF40O75150 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.26□□□□□ -1.25
RNF40O75150 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RNF40O75150 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF40O75150 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.26□□□□□ -1.25
RNF40O75150 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC7.26□□□□□ -1.25
RNF40O75150 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RNF40O75150 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC7.26□□□□□ -1.25
RNF40O75150 OR6R2P-201ENST00000609216 300 ntBASIC7.26□□□□□ -1.25
RNF40O75150 DLEU2_5.1-201ENST00000615567 84 ntBASIC7.26□□□□□ -1.25
RNF40O75150 RN7SL126P-201ENST00000616400 299 ntBASIC7.26□□□□□ -1.25
RNF40O75150 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.26□□□□□ -1.25
RNF40O75150 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RNF40O75150 AC011755.1-201ENST00000623763 2049 ntBASIC7.26□□□□□ -1.25
RNF40O75150 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF40O75150 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF40O75150 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF40O75150 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF40O75150 AC004158.1-201ENST00000564508 4319 ntBASIC7.26□□□□□ -1.25
RNF40O75150 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF40O75150 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RNF40O75150 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms