Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.86□□□□□ -1.79
LSM1O15116 U3.22-201ENST00000391120 215 ntBASIC3.86□□□□□ -1.79
LSM1O15116 AC007390.1-201ENST00000415722 356 ntBASIC3.86□□□□□ -1.79
LSM1O15116 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.86□□□□□ -1.79
LSM1O15116 AIMP1P1-201ENST00000418670 937 ntBASIC3.86□□□□□ -1.79
LSM1O15116 AC114814.2-201ENST00000419195 485 ntBASIC3.86□□□□□ -1.79
LSM1O15116 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.86□□□□□ -1.79
LSM1O15116 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.86□□□□□ -1.79
LSM1O15116 AC023141.6-201ENST00000429418 337 ntBASIC3.86□□□□□ -1.79
LSM1O15116 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.86□□□□□ -1.79
LSM1O15116 KCTD9P3-201ENST00000434597 1169 ntBASIC3.86□□□□□ -1.79
LSM1O15116 RPS4XP4-201ENST00000443195 763 ntBASIC3.86□□□□□ -1.79
LSM1O15116 TVP23BP2-201ENST00000455082 615 ntBASIC3.86□□□□□ -1.79
LSM1O15116 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.86□□□□□ -1.79
LSM1O15116 AP000873.1-201ENST00000463987 400 ntBASIC3.86□□□□□ -1.79
LSM1O15116 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.86□□□□□ -1.79
LSM1O15116 AC007686.1-201ENST00000488511 463 ntBASIC3.86□□□□□ -1.79
LSM1O15116 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LSM1O15116 IGBP1P5-201ENST00000507524 1000 ntBASIC3.86□□□□□ -1.79
LSM1O15116 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LSM1O15116 RNU6-760P-201ENST00000516078 97 ntBASIC3.86□□□□□ -1.79
LSM1O15116 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.86□□□□□ -1.79
LSM1O15116 MIR5096-201ENST00000583713 70 ntBASIC3.86□□□□□ -1.79
LSM1O15116 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.86□□□□□ -1.79
LSM1O15116 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.86□□□□□ -1.79
LSM1O15116 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.86□□□□□ -1.79
LSM1O15116 AC007687.1-201ENST00000602704 304 ntBASIC3.86□□□□□ -1.79
LSM1O15116 AC099778.2-201ENST00000610904 211 ntBASIC3.86□□□□□ -1.79
LSM1O15116 AC124312.6-202ENST00000623624 418 ntBASIC3.86□□□□□ -1.79
LSM1O15116 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.86□□□□□ -1.79
LSM1O15116 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.86□□□□□ -1.79
LSM1O15116 AC022031.1-201ENST00000585985 2593 ntBASIC3.85□□□□□ -1.79
LSM1O15116 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 MIR383-201ENST00000362257 73 ntBASIC3.85□□□□□ -1.79
LSM1O15116 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 AC136624.1-201ENST00000400791 413 ntBASIC3.85□□□□□ -1.79
LSM1O15116 HMGB3P19-201ENST00000403971 560 ntBASIC3.85□□□□□ -1.79
LSM1O15116 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 PRELID3BP11-201ENST00000414230 479 ntBASIC3.85□□□□□ -1.79
LSM1O15116 AC127526.1-201ENST00000417526 366 ntBASIC3.85□□□□□ -1.79
LSM1O15116 AC245028.1-201ENST00000423259 256 ntBASIC3.85□□□□□ -1.79
LSM1O15116 AC023347.2-201ENST00000433994 462 ntBASIC3.85□□□□□ -1.79
LSM1O15116 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.85□□□□□ -1.79
LSM1O15116 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.85□□□□□ -1.79
LSM1O15116 RPS29P33-201ENST00000456717 146 ntBASIC3.85□□□□□ -1.79
LSM1O15116 RPL7P24-201ENST00000493052 752 ntBASIC3.85□□□□□ -1.79
LSM1O15116 UBE2CP3-201ENST00000502715 450 ntBASIC3.85□□□□□ -1.79
LSM1O15116 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.85□□□□□ -1.79
LSM1O15116 SNX5P1-201ENST00000505757 1041 ntBASIC3.85□□□□□ -1.79
LSM1O15116 AC026726.1-201ENST00000512859 601 ntBASIC3.85□□□□□ -1.79
LSM1O15116 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.85□□□□□ -1.79
LSM1O15116 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.85□□□□□ -1.79
LSM1O15116 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.85□□□□□ -1.79
LSM1O15116 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.85□□□□□ -1.79
LSM1O15116 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.85□□□□□ -1.79
LSM1O15116 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 AC006116.5-201ENST00000591936 559 ntBASIC3.85□□□□□ -1.79
LSM1O15116 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.85□□□□□ -1.79
LSM1O15116 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 AC114781.5-201ENST00000615297 108 ntBASIC3.85□□□□□ -1.79
LSM1O15116 MIR3653-201ENST00000625572 110 ntBASIC3.85□□□□□ -1.79
LSM1O15116 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.85□□□□□ -1.79
LSM1O15116 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.85□□□□□ -1.79
LSM1O15116 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 MTND4P31-201ENST00000425607 1343 ntBASIC3.85□□□□□ -1.79
LSM1O15116 LARP1BP1-201ENST00000506036 1359 ntBASIC3.85□□□□□ -1.79
LSM1O15116 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 AC005183.1-201ENST00000603687 1979 ntBASIC3.85□□□□□ -1.79
LSM1O15116 AL049737.1-201ENST00000413920 1403 ntBASIC3.85□□□□□ -1.79
LSM1O15116 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
LSM1O15116 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.84□□□□□ -1.79
LSM1O15116 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LSM1O15116 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LSM1O15116 AL590290.1-201ENST00000405336 380 ntBASIC3.84□□□□□ -1.79
LSM1O15116 HSPE1P12-201ENST00000412576 301 ntBASIC3.84□□□□□ -1.79
LSM1O15116 LINC01881-201ENST00000416103 412 ntBASIC3.84□□□□□ -1.79
LSM1O15116 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LSM1O15116 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.84□□□□□ -1.79
LSM1O15116 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.84□□□□□ -1.79
LSM1O15116 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.84□□□□□ -1.79
LSM1O15116 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.84□□□□□ -1.79
LSM1O15116 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.84□□□□□ -1.79
LSM1O15116 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.84□□□□□ -1.79
LSM1O15116 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LSM1O15116 RPL38P1-201ENST00000460914 211 ntBASIC3.84□□□□□ -1.79
LSM1O15116 RPL37P6-202ENST00000464216 403 ntBASIC3.84□□□□□ -1.79
LSM1O15116 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.84□□□□□ -1.79
LSM1O15116 AC091167.1-201ENST00000492017 396 ntBASIC3.84□□□□□ -1.79
LSM1O15116 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.84□□□□□ -1.79
LSM1O15116 RPS27AP13-201ENST00000498403 237 ntBASIC3.84□□□□□ -1.79
LSM1O15116 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms