Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RNU6-444P-201ENST00000383988 108 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 SNORD116-9-201ENST00000384000 95 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 SNORD116-3-201ENST00000384287 95 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 SNORD116-7-201ENST00000384404 95 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 SNORD116-5-201ENST00000384462 95 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 SNORD116-23-201ENST00000384645 92 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 SNORA66-201ENST00000384792 133 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AL161909.1-201ENST00000397390 712 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AL035079.1-201ENST00000405210 287 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 RAP1BP3-201ENST00000407180 549 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 U3.32-201ENST00000408116 212 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM38O00635 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM38O00635 MRPS36P1-201ENST00000421291 307 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM38O00635 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM38O00635 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM38O00635 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.98□□□□□ -1.61
TRIM38O00635 RPL21P43-201ENST00000425440 472 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM38O00635 HIGD1AP4-201ENST00000430194 280 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AC009238.2-201ENST00000431026 355 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM38O00635 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.98□□□□□ -1.61
TRIM38O00635 AL031667.1-201ENST00000440222 725 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 MTCO2P25-201ENST00000447065 681 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM38O00635 RPL5P24-201ENST00000463742 885 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AC063943.1-201ENST00000465434 453 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM38O00635 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.98□□□□□ -1.61
TRIM38O00635 AC108734.3-201ENST00000481241 1165 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 RN7SL346P-201ENST00000491561 294 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AC073073.1-201ENST00000493920 463 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM38O00635 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.98□□□□□ -1.61
TRIM38O00635 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.98□□□□□ -1.61
TRIM38O00635 AC025674.1-201ENST00000507074 324 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AC109471.1-201ENST00000511631 612 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM38O00635 RNU6-202P-201ENST00000515998 96 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 RNU6-885P-201ENST00000516607 104 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AC105185.1-201ENST00000518705 535 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AC087808.1-201ENST00000520501 361 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM38O00635 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.98□□□□□ -1.61
TRIM38O00635 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.98□□□□□ -1.61
TRIM38O00635 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.98□□□□□ -1.61
TRIM38O00635 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.98□□□□□ -1.61
TRIM38O00635 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM38O00635 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.98□□□□□ -1.61
TRIM38O00635 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM38O00635 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.98□□□□□ -1.61
TRIM38O00635 AC116553.2-201ENST00000564203 463 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 BGLT3-201ENST00000564523 994 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AC067959.1-201ENST00000604334 379 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AL354760.1-201ENST00000608357 643 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AC245297.2-201ENST00000610119 565 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 AC107075.1-201ENST00000613695 314 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 MIR6864-201ENST00000617935 70 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.98□□□□□ -1.61
TRIM38O00635 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM38O00635 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM38O00635 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM38O00635 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM38O00635 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM38O00635 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM38O00635 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM38O00635 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
TRIM38O00635 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TRIM38O00635 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM38O00635 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM38O00635 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM38O00635 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM38O00635 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM38O00635 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM38O00635 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
TRIM38O00635 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
TRIM38O00635 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM38O00635 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM38O00635 RNU6-115P-201ENST00000364310 107 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM38O00635 RNU6-398P-201ENST00000384143 109 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 Y_RNA.465-201ENST00000384293 102 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 AL390316.1-201ENST00000406279 553 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM38O00635 RPL30P16-201ENST00000419341 429 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 GTF2IP23-201ENST00000423746 351 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 AC012519.1-201ENST00000424588 610 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 AC092017.2-201ENST00000427600 362 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM38O00635 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM38O00635 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM38O00635 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 SEPT7P5-201ENST00000434048 306 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 AL161722.2-201ENST00000434731 981 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM38O00635 RPL7AP61-201ENST00000443410 636 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms