Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL807761.1-201ENST00000417622 171 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 FAR2P4-202ENST00000425399 584 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.99□□□□□ -1.77
PDLIM1O00151 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM1O00151 AL512661.1-201ENST00000434586 1253 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.99□□□□□ -1.77
PDLIM1O00151 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.99□□□□□ -1.77
PDLIM1O00151 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.99□□□□□ -1.77
PDLIM1O00151 AC078785.3-201ENST00000476607 425 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 RN7SL459P-201ENST00000481078 302 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.99□□□□□ -1.77
PDLIM1O00151 AC104164.2-201ENST00000496953 495 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 ATP1B1P1-201ENST00000509767 915 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 AC133963.2-201ENST00000513686 578 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM1O00151 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM1O00151 OR5AK3P-201ENST00000527486 1297 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM1O00151 AC010857.1-201ENST00000606398 594 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 AC128687.2-201ENST00000609657 566 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 U6.48-201ENST00000618523 106 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 AC007546.1-201ENST00000619452 559 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.99□□□□□ -1.77
PDLIM1O00151 AC083865.1-201ENST00000636634 831 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.99□□□□□ -1.77
PDLIM1O00151 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PDLIM1O00151 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.99□□□□□ -1.77
PDLIM1O00151 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
PDLIM1O00151 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.99□□□□□ -1.77
PDLIM1O00151 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.99□□□□□ -1.77
PDLIM1O00151 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM1O00151 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.99□□□□□ -1.77
PDLIM1O00151 AL137100.1-201ENST00000556703 1620 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 AC090229.1-201ENST00000590983 1609 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM1O00151 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM1O00151 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM1O00151 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PDLIM1O00151 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM1O00151 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM1O00151 ZNF826P-207ENST00000622273 1910 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.98□□□□□ -1.77
PDLIM1O00151 METTL21EP-201ENST00000298105 713 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM1O00151 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PDLIM1O00151 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.98□□□□□ -1.77
PDLIM1O00151 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.98□□□□□ -1.77
PDLIM1O00151 RPL7P29-201ENST00000437151 728 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.98□□□□□ -1.77
PDLIM1O00151 TPTE2P6-202ENST00000445572 1007 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 RPL7P55-201ENST00000450522 746 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 MTCO3P20-201ENST00000454926 688 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 snoU13.1-201ENST00000459157 104 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.98□□□□□ -1.77
PDLIM1O00151 MTND1P36-201ENST00000522384 936 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 AC113192.3-201ENST00000529152 742 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 AC068831.4-201ENST00000556118 109 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.98□□□□□ -1.77
PDLIM1O00151 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.98□□□□□ -1.77
PDLIM1O00151 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.98□□□□□ -1.77
PDLIM1O00151 AC098483.2-201ENST00000603158 454 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 AC011374.2-201ENST00000607135 526 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 AC012409.3-201ENST00000611343 981 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 RNVU1-4-201ENST00000612985 164 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PDLIM1O00151 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 AL163051.2-201ENST00000618976 735 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 AP000843.1-201ENST00000624880 701 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 MIR7641-1-201ENST00000627518 61 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.98□□□□□ -1.77
PDLIM1O00151 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.98□□□□□ -1.77
PDLIM1O00151 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.98□□□□□ -1.77
PDLIM1O00151 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
PDLIM1O00151 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM1O00151 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM1O00151 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM1O00151 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM1O00151 AP001486.2-201ENST00000561652 5113 ntBASIC3.98□□□□□ -1.77
PDLIM1O00151 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDLIM1O00151 MTND4P31-201ENST00000425607 1343 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM1O00151 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM1O00151 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM1O00151 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM1O00151 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM1O00151 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM1O00151 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PDLIM1O00151 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM1O00151 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM1O00151 RNA5SP443-201ENST00000363083 132 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM1O00151 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM1O00151 RPL7AP25-201ENST00000423357 805 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 RPL30P3-201ENST00000424262 333 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 VDAC1P6-201ENST00000430062 855 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 AC068287.1-201ENST00000430283 295 ntBASIC3.97□□□□□ -1.77
PDLIM1O00151 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM1O00151 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM1O00151 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.97□□□□□ -1.77
PDLIM1O00151 AC087650.1-201ENST00000431445 468 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms