Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC66A2RUB6 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC66A2RUB6 AC092447.7-201ENST00000422212 1621 ntBASIC5.66□□□□□ -1.5
CCDC66A2RUB6 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC66A2RUB6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC66A2RUB6 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AL079343.1-201ENST00000572358 1771 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 OR9G4-201ENST00000302957 984 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 Y_RNA.41-201ENST00000362646 102 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 RNU6-501P-201ENST00000364072 100 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC007066.1-201ENST00000392902 381 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 UBTFL3-201ENST00000418934 1024 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 B3GNT2P1-201ENST00000434960 952 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 UBE2V1P3-201ENST00000439651 417 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 MTND2P20-201ENST00000440805 661 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC004865.1-201ENST00000442276 1003 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 NPM1P39-201ENST00000449818 867 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 NDUFA5P7-201ENST00000452914 242 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AL035090.1-201ENST00000454835 332 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 RPL18AP17-201ENST00000455326 198 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 RPL37P3-201ENST00000456825 293 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC005229.2-201ENST00000456995 399 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 UBTFL6-201ENST00000477929 1024 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 RPL9P33-201ENST00000484311 566 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 RPL15P21-201ENST00000495592 567 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 BNIP3P41-201ENST00000503774 571 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC025674.1-201ENST00000507074 324 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 MTND4LP26-201ENST00000518144 282 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC087276.1-201ENST00000529659 480 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC137768.1-201ENST00000549998 553 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 RNF138P2-201ENST00000603490 592 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC009027.1-201ENST00000604510 479 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC090186.1-201ENST00000605991 572 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 LINC00901.1-201ENST00000617252 152 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC127024.6-201ENST00000621598 424 ntBASIC5.65□□□□□ -1.5
CCDC66A2RUB6 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC66A2RUB6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
CCDC66A2RUB6 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CCDC66A2RUB6 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC66A2RUB6 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC66A2RUB6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
CCDC66A2RUB6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC66A2RUB6 SALL4P2-201ENST00000423288 2910 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 OR10J6P-201ENST00000289731 930 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 TMSB4XP4-201ENST00000323496 618 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 RNU6-216P-201ENST00000363282 104 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 RNA5SP28-201ENST00000363841 119 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 RN7SKP153-201ENST00000365026 316 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 RNU4-2-201ENST00000365668 141 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 RNU6-1042P-201ENST00000384204 107 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 RNU6-1122P-201ENST00000384449 107 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 RNU2-66P-201ENST00000410650 161 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 RNA5SP146-201ENST00000410743 123 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 RPL21P108-201ENST00000413857 481 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AC092647.1-201ENST00000420654 287 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 E2F6P2-201ENST00000420708 748 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AL662874.1-201ENST00000426065 230 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 RAB11AP1-201ENST00000442978 646 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms